RNA id: AMCG00008095


Basic Information

Item Value
RNA id AMCG00008095
length 1056
RNA type mRNA
GC content 0.54
exon number 5
gene id AMCG00008095
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 42083474 ~ 42089493 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCCTGGCACAGCATTGGAAAGCGACGCTATCAACCCAAATCCGAACATGCCGGATGACAGGAATTTATTGACCTTTGTTTTGGTGTCCAGGATGAGAAGTGAAGGGGAGAGACTGGGGACTTTCCGATTCTGGTCCAGCGATGCTCCAGTGTCCGCCACTGATCTGGCCAAAGCTGGGTTTTATTTCCTAGGAACCGGGGACAAGGTACAGTGCTTCTGCTGTGGTGGGATACTGAGACACTGGGTACAAGGAGACAGCCCCTTGGAAGAGCATAAGAGACACTTCCCGACATGCGGTTTTATACTGGGCAGGGACGTGGGAAATATCCCCCACATTTCCAGCTCTCCCGACTCCGTGGACGGACAGATTCTCAGTCAGCTGCAACGCATGACAGTGGAAGACCAAGTGGCCGGAGGGCATGCGGTTTATCCAGAGATGGAGACAGAAGAGGCACGGTTGACAACTTTCCACAACTGGCCGACCTCTGCCTCTGTGCAGCCAGAGATTCTAGCTAGAGCCGGTTTTTTCTACACTGGTCACGGTGACAACGTTAAATGCTTCTACTGTGATGGGGGACTTCGAAACTGGGAGCCAGGGGATGACCCTTGGCAAGAGCATGCAAAGTGGTTTCCACGagTGGATCTCAAAGACCAGCAGCTGGAGAGATCACATCTGGACAAGTCTCCAGTGACCCAGACTGTGATACAGATGGGGTTTGAACCCTGTCTGGTGGAGAGTTTAGTTCAGACCAAGTACCTGCTTACTGGCAATCAGTATACCTCAGTGTCTGACCTGGTGTCTGATATACTTCAAGCGGAAGAAGAGGACAGGCAAGGATCAGAACAGACTAGAGCGGGAGAGCTGAGCCCCGAGGAGCAGCTGAGACAGCTACAGGAGGAGCGCACGTGCAAAGTGTGTATGGACAAGGCCGTCTCCATTGTCTTCATTCCCTGTGGGCACCTGGTAGTGTGCACCGACTGCGCCACCAGCCTGAGGCACTGCCCTATCTGCCGCGCCGTCATCCGCGGCAGTGTCCGAGCATTCATGTCCTGA

Function

GO: NA

KEGG:

id description
K16061 BIRC7_8; baculoviral IAP repeat-containing protein 7/8

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU35535 lncRNA downstream 238269 41844956 ~ 41845987 (-) True G28378
TU35534 lncRNA downstream 241104 41842802 ~ 41843152 (-) True G28377
TU35523 lncRNA downstream 257490 41826442 ~ 41826766 (-) True G28366
TU35516 lncRNA downstream 272182 41807778 ~ 41812074 (-) True G28361
TU35456 lncRNA downstream 456504 41627361 ~ 41627752 (-) True G28325
TU35575 lncRNA upstream 1964 42091457 ~ 42092198 (-) True G28410
TU35621 lncRNA upstream 194466 42283959 ~ 42290245 (-) True G28446
TU35634 lncRNA upstream 211784 42301277 ~ 42302097 (-) True G28456
TU35673 lncRNA upstream 271415 42360908 ~ 42401074 (-) False AMCG00008104
TU35703 lncRNA upstream 386227 42475720 ~ 42476990 (-) True G28509
AMCG00008091 mRNA downstream 86572 41977687 ~ 41997684 (-) True AMCG00008091
AMCG00008089 mRNA downstream 140668 41925845 ~ 41943588 (-) True AMCG00008089
AMCG00008086 mRNA downstream 213545 41851208 ~ 41870711 (-) True AMCG00008086
AMCG00008085 mRNA downstream 234302 41847208 ~ 41849954 (-) False AMCG00008085
AMCG00008079 mRNA downstream 325384 41593802 ~ 41758872 (-) True AMCG00008079
AMCG00008096 mRNA upstream 160153 42249646 ~ 42267791 (-) True AMCG00008096
AMCG00008101 mRNA upstream 205949 42295442 ~ 42299333 (-) True AMCG00008101
AMCG00008100 mRNA upstream 221139 42310632 ~ 42330478 (-) True AMCG00008100
AMCG00008103 mRNA upstream 241646 42331139 ~ 42354632 (-) True AMCG00008103
AMCG00008104 mRNA upstream 270407 42359900 ~ 42373792 (-) True AMCG00008104
TU35536 other downstream 234366 41846933 ~ 41849890 (-) True AMCG00008085
TU35381 other downstream 882431 41199489 ~ 41201825 (-) True AMCG00008069
TU35307 other downstream 1067008 41016159 ~ 41017248 (-) True G28202
TU34865 other downstream 2579664 39500321 ~ 39504592 (-) True G27861
TU34691 other downstream 2992501 39088922 ~ 39091755 (-) False AMCG00007993
TU35782 other upstream 671511 42761004 ~ 42764654 (-) True G28581
TU36269 other upstream 2328381 44417874 ~ 44418196 (-) True G28970
TU36715 other upstream 3961202 46050695 ~ 46054346 (-) True G29301
TU36785 other upstream 4391453 46480946 ~ 46481898 (-) True G29361
TU36922 other upstream 5624441 47713934 ~ 47918462 (-) True AMCG00008245

Expression Profile