RNA id: AMCG00008132


Basic Information

Item Value
RNA id AMCG00008132
length 1440
RNA type mRNA
GC content 0.51
exon number 12
gene id AMCG00008132
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 43292596 ~ 43305530 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ACCCGTTCTCTCCTGATGGCGTCAGTCCCTGAGCATGTGTTGATGAATGAAGCACTGATAGAAGATCTGCAGAAGGTGGCTAAGGACACTGCCCTGCTTCAGGGGGTCCTGATGAGGACCAAGGAGACTCCCAATTCCTCAGAGGTTGTCAGCTATGCTCCGTTCACACTCTTCCCCTCTCCAGTACCCCGGTCTCTGTTCGAGCAGGCCCGCCAGGTCCAGACACACTTCAATCTGCTGGTGGACAGAATCAGCCAAGATGCAGAGTTCCTAGAGCAAGCACTAGCCAGCACAATCAAAGTAGATGACTTCACAGCAAAactgttcaacatctacagACAGGTTAAACAAGAGGGCTGTTCACAGCATATAGTTTTGGGTTTGAACCGCTCAGACTACATGCTGGATCCTGGAAAAGATGGCAATACATCCTTAAAGCAGATTGAGATTAACACTATAGCTGCCGGTTTGGGAGGGTTAACTTCACGGACTCCAGACGTTCATAGACACATCCTGAAGGTCGCAGGACAAGTcgaagaacagaagaaaatccTGGACAATAACCCGGTAGCAGGGTTTGCTGAGGCCATCGCCAAAGCCTGGGAGCTGTATGGCTCTGAACGGGCTGTGGTGATGTTTTTGGTTGGAGATGTTGAAATGATTCAATTTGACAATCGATTTGCTGAGTATGAGCTCTGGAGCAGAAATATCGCTGTCATACGCAGGAGGTTTGATGATGTGAGCAAAAGGGCATCCCTGGATCAGAACAAGAGGCTGTTTATaGATGGTAAAGAAGTTGctattgtgtatttttggaATGGGTACATGCCTCAGAACTACACAGAACAGGGCTGGGAGGCCAGTCTGATGATGGAGCGCTCCCGGGCAGTGAAGTGCCCTGATATCAGTACCCACCTGGCCGGGACCAAGAAGGTCCAGCAGGAAGTGTCTCGGCCAGGGGTTCTGGAGCGTTTCTTCCCTGACGATCCTAAGGCTGTCGCACAGATAAGAGCTACCTTTGCTGGGCTTTACAGCCTGGACATGGGAGAAGAAGGAGACAGAACAGTAGCTATGGCCATAGCTAACCCAGACCACTTTGTCTTAAAGCcccagagagaaggaggagGTAACAATATCTACGGTGAAGACATCTGCCAGGTGCTGGAAAGTGTCAAAGAAAACTCAGAGAGGTGCGCCTACATTCTGATGGACAAAATCCGGCCTCAGCCAGTGAGGAACTACCTGTTGAGATCAGGAAGCCCACTGAAGCTCAGCACCTGCCTGAGTGAGCTGGGCATGTTCGGAGCCTACGTCAGGCAGGGGAAGGGCATGGTGCTGAATGAATGTACAGGACATCTCCTGAGGACCAAGAGTGATGAACACTCGGATGGGGGTTTGACAGCTGGGGTGGCAGTGCTGGACAACCCCCTCCTTATCTGA

Function

GO:

id name namespace
GO:0006750 glutathione biosynthetic process biological_process
GO:0005524 ATP binding molecular_function
GO:0004363 glutathione synthase activity molecular_function

KEGG:

id description
K21456 GSS; glutathione synthase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU35900 lncRNA upstream 91466 43177802 ~ 43201203 (+) True G28678
TU35847 lncRNA upstream 171888 43109050 ~ 43120781 (+) True G28637
TU35743 lncRNA upstream 670512 42621950 ~ 42622157 (+) True G28548
TU35721 lncRNA upstream 706001 42584232 ~ 42586668 (+) True G28527
TU35705 lncRNA upstream 791688 42500674 ~ 42500981 (+) True G28511
TU36139 lncRNA downstream 588579 43894109 ~ 43895951 (+) True G28862
TU36138 lncRNA downstream 588655 43894185 ~ 43895951 (+) False G28862
TU36140 lncRNA downstream 588655 43894185 ~ 43895128 (+) False G28862
TU36226 lncRNA downstream 748435 44053965 ~ 44056608 (+) True G28931
TU36252 lncRNA downstream 1386011 44691541 ~ 44749908 (+) True G28956
AMCG00008128 mRNA upstream 33474 43252597 ~ 43259195 (+) True AMCG00008128
AMCG00008130 mRNA upstream 41143 43232310 ~ 43251526 (+) True AMCG00008130
AMCG00008127 mRNA upstream 69543 43219099 ~ 43223126 (+) True AMCG00008127
AMCG00008121 mRNA upstream 117543 43159569 ~ 43175126 (+) True AMCG00008121
AMCG00008120 mRNA upstream 136597 43144805 ~ 43156072 (+) True AMCG00008120
AMCG00008141 mRNA downstream 31411 43336941 ~ 43338038 (+) True AMCG00008141
AMCG00008143 mRNA downstream 86574 43392104 ~ 43410731 (+) True AMCG00008143
AMCG00008142 mRNA downstream 166120 43471650 ~ 43494202 (+) True AMCG00008142
AMCG00008140 mRNA downstream 191758 43497288 ~ 43507053 (+) True AMCG00008140
AMCG00008146 mRNA downstream 299727 43605257 ~ 43621143 (+) True AMCG00008146
TU35886 other upstream 143626 43146773 ~ 43149043 (+) False AMCG00008120
TU35844 other upstream 184427 43105713 ~ 43108242 (+) True G28636
TU35555 other upstream 1299292 41992859 ~ 41993377 (+) True G28395
TU35066 other upstream 3045431 40241312 ~ 40247238 (+) True AMCG00008036
TU35023 other upstream 3233283 40056632 ~ 40059386 (+) True G27974
TU36366 other downstream 1717618 45023148 ~ 45036416 (+) True AMCG00008177
TU36420 other downstream 1843899 45149429 ~ 45171828 (+) True AMCG00008185
TU36476 other downstream 2035066 45340596 ~ 45343914 (+) False AMCG00008194
TU36524 other downstream 2134983 45440513 ~ 45441064 (+) True G29183
TU36777 other downstream 2962361 46267891 ~ 46268327 (+) True G29353

Expression Profile