RNA id: AMCG00008137


Basic Information

Item Value
RNA id AMCG00008137
length 2020
RNA type mRNA
GC content 0.45
exon number 12
gene id AMCG00008137
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 43367520 ~ 43381863 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ACTCCCAATTCCTCAGAGGTTGTCAGCTATGCTCCGTTCACACTCTTCCCCTCTCCAGTACCCCGGTCTCTGTTCGAGCAGGCGCGCCAGGTCCAGACACACTTCAATCTGCTGGTGGACAGAATCAGCCAAGATGCAGAGTTCCTGGAGCAAGCACTAGCCAGCACAATCAAAGTAGATGACTTCACAGCGAGactgttcaacatctacagACAGGTTATACAAGAGGGCTGTTCACAGCCTATAGTTTTGGGTTTGAACCGCTCAGACTACATGCTGGACCTTGGGAAAGATGGGAATACATCCTTAAAGCAGATTGAGATTAACACTATAGCTGCCAGTTTTGGAGGGATAACATCGCGGACTCCAGACGTTCATAGACACATCCTGAAGGTCGCAGGCCGAGTTgaggaacagaagaaaatcCTGGACAATAACCCGGCAGCAGGGTTTGCCGAGGCCATCGCCAAAGCCTGGGAGCTGTATAGCTCTGAACGGGCTGTGGTGATGTTTTTGGTTGAAGATGTCCAACAGAATATATATGACCATCGATTTGTTGAAAATGAGCTCTGGAGCAGAAATATCGCTGTCATACGGAGGAGGTTTGATGATGTGAGCAAAAGGGCGTCCCTGGATCAGAACAAGAGGCTGTTTATagatGGTAAAGAAGTTGCTATTGTGTATTTCCGGAATGGGTACATGCCTCAGAACTACACAGAACAGGGCTGGGAGGCCAGACTGATGATGGAGCGCTCCCGGGCAGTGAAGTGCCCTGACATCAGTACCCACCTGGCCGGGACCAAGAAGGGAGAAGAAGGAGACAGAACAGTAGCTATGGCCATAGCTAACCCAGACCACTTTGTCTTAAAGCcccagagagaaggaggagGTAACAATATCTACGGCGAAGACATCTGCCAGGTGCTGGACAGTGTCAAAGAGAACTTGGAGAGGAGTGCCTACATTCTGATGGACAAAATCCGGCCTCAGCCAGTGAGGAACTACCTGTTGAGATCAGGAAGCCCACTGAAGCTCAGCACCTGCCTGAGTGAGCTGGGCATGTTCGGAGCCTACGTCAGGCAGGGGAAGGGCATGGTGCTGAATGAGTGTACAGGACATCTCCTGAGGACCAAGAGTGCTGAACACTCGGATGGGGGTGTGGCAGCCGGGGTGGCAGTGCTGGACAACCCCCTCCTCATCTAACAACACTGCCTCCCTTGGTGCGGAGGAGTAACTGCACAACTGAACAGCTATACTAATCAAGTACCAGCATCAAATTATGCACCCTGCTTTAACATAGGGGAGAGACTAAATGTAAAattcttttcaaatgtattcctttatttttcttttatatggAATCATGGTTGGAACTGTAAAGtctaaaacctttaaaaaaaaaaaaaatgttttacactgTAAAGCTAATGTGGTCATAATAATGGGCAATTTCTCTACAATGGAATAGCAGGTCCCTGATCTACTGTACCCTGCAAGGCACAGACTTAAATGTGAATTAACCTGCAGAACATCTGAACTAATTCACAATGAAAGAAGTACAGGAACTGTGCCAATATTTAGATGTCAAAGCAAAAGTATTGAAATAAGTGAATGGTGATGCAAGTAGGATTGTAGATGCATTATTTTATCAAAAGGTTTGGGTTCTTTGTACATATAATACAagtatatattgtgacacagtgGAGGGTTGTGTATCATACATGAAAGATGTATATGGGGGTTGCAAGCAGAGAGCTTCACAGGAAACAGAGTTCAAGAAACAGCCGATCTAAGGCTTAGTTTATTTTAGTCTACAAGAGGGGCTTTACAATAGAGAATAttcaaaaaagaaaccaaaatctAATAAAACCTAGCTTCTTTGAGCCTTCACTGCACTTTATTCCAGTCCCTGTCCAAGCCTGTACAGCTAAGCTGTAGaccagttaaaaaacaaaaaaaaacaataacaaaagaagAAAGTTCTTAGCAATTTAGAAGGAGGCAAGCAGGAAaggtttag

Function

GO:

id name namespace
GO:0006750 glutathione biosynthetic process biological_process
GO:0005524 ATP binding molecular_function
GO:0004363 glutathione synthase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU35870 lncRNA downstream 269047 43097198 ~ 43098473 (-) False AMCG00008124
TU35727 lncRNA downstream 772660 42522805 ~ 42594860 (-) True G28532
TU35706 lncRNA downstream 866524 42500677 ~ 42500996 (-) True G28512
TU35703 lncRNA downstream 890530 42475720 ~ 42476990 (-) True G28509
TU35673 lncRNA downstream 966446 42360908 ~ 42401074 (-) False AMCG00008104
TU36079 lncRNA upstream 128897 43510760 ~ 43583413 (-) False AMCG00008144
TU36187 lncRNA upstream 481744 43863607 ~ 43893808 (-) True G28900
TU36196 lncRNA upstream 512316 43894179 ~ 43895951 (-) True G28907
TU36208 lncRNA upstream 614255 43996118 ~ 44000866 (-) True G28914
TU36272 lncRNA upstream 1105347 44487210 ~ 44487419 (-) True G28973
AMCG00008138 mRNA downstream 16776 43350099 ~ 43350744 (-) True AMCG00008138
AMCG00008133 mRNA downstream 96946 43269017 ~ 43270574 (-) True AMCG00008133
AMCG00008134 mRNA downstream 123262 43233233 ~ 43244258 (-) True AMCG00008134
AMCG00008131 mRNA downstream 157174 43205458 ~ 43210346 (-) True AMCG00008131
AMCG00008129 mRNA downstream 175024 43177736 ~ 43192496 (-) True AMCG00008129
AMCG00008139 mRNA upstream 14727 43396590 ~ 43408933 (-) True AMCG00008139
AMCG00008136 mRNA upstream 29346 43411209 ~ 43432086 (-) True AMCG00008136
AMCG00008135 mRNA upstream 50813 43432676 ~ 43440066 (-) True AMCG00008135
AMCG00008144 mRNA upstream 130998 43512861 ~ 43530087 (-) True AMCG00008144
AMCG00008147 mRNA upstream 151696 43533559 ~ 43556033 (-) True AMCG00008147
TU35782 other downstream 602866 42761004 ~ 42764654 (-) True G28581
TU35536 other downstream 1517630 41846933 ~ 41849890 (-) True AMCG00008085
TU35381 other downstream 2165695 41199489 ~ 41201825 (-) True AMCG00008069
TU35307 other downstream 2350272 41016159 ~ 41017248 (-) True G28202
TU34865 other downstream 3862928 39500321 ~ 39504592 (-) True G27861
TU36269 other upstream 1036011 44417874 ~ 44418196 (-) True G28970
TU36715 other upstream 2668832 46050695 ~ 46054346 (-) True G29301
TU36785 other upstream 3099083 46480946 ~ 46481898 (-) True G29361
TU36922 other upstream 4332071 47713934 ~ 47918462 (-) True AMCG00008245
TU36999 other upstream 4742062 48123925 ~ 48124682 (-) True G29544

Expression Profile