RNA id: AMCG00008156



Basic Information


Item Value
RNA id AMCG00008156
length 738
RNA type mRNA
GC content 0.52
exon number 2
gene id AMCG00008156
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 44034386 ~ 44036127 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGAGACAGACAAAGGGACAAATTTGATGGAGGCCACCGAGAACGGGATAACAACCAAGGCCCTTCACGTCTCTCGGAAGAAAGGCAAAGTCAGTTAtctgaggagaggaggagagaacgCGATGGTGCACATGGAAGGCCATGGGATAGAAACCAGGGTAAACCTTGGAGCAGAGATCGTGAATgggacagaaacagagagagagacagggagactgACCGGAGCAGAGGAAGAGACTGGGAAAGGCATAGAGACAGAGAAGGGGATGGGGACAGGAAGAGAGACCGAGATCGTGACAGAGAccgagacagagaaagagacagaggcagGGAACGAGAGGCGGACAGGCGGGACCATGACCGAGACAGAGCAAGGAACAGAGACCGAGATCGGGACCGGGATCGGGATCGTGACAGAGACCGAGACAGAAGACGTGATCGGGATCGGTCCAGAAGCAGAGACAGAGATCGTGGAAGAGATCGGGACAGAGACCGCACAAGGGACAGAGACCGAGACAGGGACAAGGATAGGGACAGAGAAAAAGACCGAGATAGAAGGGATAGAAGCAAGAGCAAAGACAAGAGCAAAGACACCAAACCTGAAGCTCCGAAGGAGACTGAAAAACCTGCCGAAACAGAGACTCCTTCTGACAAGAACACAACATCCTAAACAGGATTCATGGAATGGATTTGAAGCCCAGAAAGCATCTGCTTTGAAGAATGACAAAAATGTGTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36139 lncRNA upstream 138435 43894109 ~ 43895951 (+) True G28862
TU36138 lncRNA upstream 138435 43894185 ~ 43895951 (+) False G28862
TU36140 lncRNA upstream 139258 43894185 ~ 43895128 (+) False G28862
TU35900 lncRNA upstream 833183 43177802 ~ 43201203 (+) True G28678
TU35847 lncRNA upstream 913605 43109050 ~ 43120781 (+) True G28637
TU36226 lncRNA downstream 17838 44053965 ~ 44056608 (+) True G28931
TU36252 lncRNA downstream 655414 44691541 ~ 44749908 (+) True G28956
TU36298 lncRNA downstream 732550 44768677 ~ 44816663 (+) True G28991
TU36303 lncRNA downstream 759797 44795924 ~ 44798463 (+) True G28995
TU36485 lncRNA downstream 1317589 45353716 ~ 45354079 (+) True G29148
AMCG00008155 mRNA upstream 46 44001734 ~ 44034340 (+) True AMCG00008155
AMCG00008154 mRNA upstream 34553 43976301 ~ 43999833 (+) True AMCG00008154
AMCG00008149 mRNA upstream 141288 43854025 ~ 43893098 (+) True AMCG00008149
AMCG00008150 mRNA upstream 338822 43678115 ~ 43695564 (+) True AMCG00008150
AMCG00008145 mRNA upstream 370678 43662564 ~ 43663708 (+) True AMCG00008145
AMCG00008153 mRNA downstream 4651 44040778 ~ 44044810 (+) True AMCG00008153
AMCG00008157 mRNA downstream 70328 44106455 ~ 44131719 (+) True AMCG00008157
AMCG00008160 mRNA downstream 223848 44259975 ~ 44268323 (+) True AMCG00008160
AMCG00008167 mRNA downstream 541245 44577372 ~ 44653905 (+) True AMCG00008167
AMCG00008162 mRNA downstream 629509 44665636 ~ 44683700 (+) True AMCG00008162
TU35919 other upstream 732964 43292596 ~ 43301422 (+) False AMCG00008132
TU35886 other upstream 885343 43146773 ~ 43149043 (+) False AMCG00008120
TU35844 other upstream 926144 43105713 ~ 43108242 (+) True G28636
TU35555 other upstream 2041009 41992859 ~ 41993377 (+) True G28395
TU35066 other upstream 3787148 40241312 ~ 40247238 (+) True AMCG00008036
TU36366 other downstream 987021 45023148 ~ 45036416 (+) True AMCG00008177
TU36420 other downstream 1113302 45149429 ~ 45171828 (+) True AMCG00008185
TU36476 other downstream 1304469 45340596 ~ 45343914 (+) False AMCG00008194
TU36524 other downstream 1404386 45440513 ~ 45441064 (+) True G29183
TU36777 other downstream 2231764 46267891 ~ 46268327 (+) True G29353

Expression Profile