RNA id: AMCG00008166


Basic Information

Item Value
RNA id AMCG00008166
length 618
RNA type mRNA
GC content 0.51
exon number 3
gene id AMCG00008166
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 44778736 ~ 44786186 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TGGAAATGGCTCTGTGATTGTTACAGACTGATTTCCATGTCTCAAAGAGAAGCAGACTTACATTGGCAATGAATAAGGCAAGCGGAGGCATATATCCTTATTGCCACTTTTATGGATGTTGTGAATCCAGTACCTTCTGTATAGAGGACTGTATACCAAAGTCCAGGTATACTAAACCTGTGTGATCAGCACTGTCCTCTATGGAAGGGAGTCCTGGACGACTCGCACACGCCAGGAAAGACGGCTGAGCGAAAAAGCAAGCAAGAATGAGCGAAatagagagggggagggggggcagagagagcaggacttCAGTCAGTAAGGAGGGATCTGGGAGAAGCAGAGGGAGAGCAGAAAGATGAAGCTGAAGtaaggagggagaggaagatgAGGCAGAGGGAGAGCTGGAAGAGCAAGAGTGGGAGCCAGGGATTGAAGAGCAGCACACTGGGCACAAGTCCAGTAGGAATCACGGATGAGGCCAACACCAAGCTGCGCGCAAAACCCACCGCATCCTCATTGGCAGATAAAGCTGGGCTGCTGAGCCAGGCGGATACAGGTTATCCATTGGTGGACACGGCACGCATTGTCCAGTGCTGTGTGATGCTGGATATCTAG

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36275 lncRNA downstream 90561 44682437 ~ 44688175 (-) True G28976
TU36278 lncRNA downstream 96967 44681425 ~ 44681769 (-) True G28978
TU36277 lncRNA downstream 98694 44679816 ~ 44680042 (-) True G28977
TU36273 lncRNA downstream 112159 44666343 ~ 44666577 (-) True G28974
TU36272 lncRNA downstream 291317 44487210 ~ 44487419 (-) True G28973
TU36401 lncRNA upstream 248259 45034445 ~ 45036413 (-) True G29081
TU36439 lncRNA upstream 363315 45149501 ~ 45151327 (-) False AMCG00008192
TU36509 lncRNA upstream 567621 45353807 ~ 45354086 (-) True G29170
TU36523 lncRNA upstream 633404 45419590 ~ 45420462 (-) True G29182
TU36533 lncRNA upstream 675593 45461779 ~ 45462530 (-) True G29192
AMCG00008163 mRNA downstream 203 44776653 ~ 44778533 (-) True AMCG00008163
AMCG00008165 mRNA downstream 26278 44749090 ~ 44752458 (-) True AMCG00008165
AMCG00008164 mRNA downstream 37821 44721739 ~ 44740915 (-) True AMCG00008164
AMCG00008158 mRNA downstream 695888 44073663 ~ 44082848 (-) True AMCG00008158
AMCG00008159 mRNA downstream 706751 44044933 ~ 44071985 (-) True AMCG00008159
AMCG00008174 mRNA upstream 9740 44795926 ~ 44814080 (-) True AMCG00008174
AMCG00008173 mRNA upstream 66103 44852289 ~ 44872215 (-) True AMCG00008173
AMCG00008172 mRNA upstream 92824 44879010 ~ 44883212 (-) True AMCG00008172
AMCG00008175 mRNA upstream 165212 44951398 ~ 44963177 (-) True AMCG00008175
AMCG00008176 mRNA upstream 185154 44971340 ~ 44983745 (-) True AMCG00008176
TU36269 other downstream 360540 44417874 ~ 44418196 (-) True G28970
TU35782 other downstream 2014082 42761004 ~ 42764654 (-) True G28581
TU35536 other downstream 2928846 41846933 ~ 41849890 (-) True AMCG00008085
TU35381 other downstream 3576911 41199489 ~ 41201825 (-) True AMCG00008069
TU35307 other downstream 3761488 41016159 ~ 41017248 (-) True G28202
TU36715 other upstream 1264509 46050695 ~ 46054346 (-) True G29301
TU36785 other upstream 1694760 46480946 ~ 46481898 (-) True G29361
TU36922 other upstream 2927748 47713934 ~ 47918462 (-) True AMCG00008245
TU36999 other upstream 3337739 48123925 ~ 48124682 (-) True G29544
TU37036 other upstream 3495156 48281342 ~ 48283213 (-) False AMCG00008256

Expression Profile