Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00008169 |
| length | 936 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 8 |
| gene id | AMCG00008169 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 44753045 ~ 44760831 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| K15623 | SS18, SSXT, SYT; protein SSXT |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU36252 | lncRNA | upstream | 3137 | 44691541 ~ 44749908 (+) | True | G28956 |
| TU36226 | lncRNA | upstream | 696437 | 44053965 ~ 44056608 (+) | True | G28931 |
| TU36139 | lncRNA | upstream | 857094 | 43894109 ~ 43895951 (+) | True | G28862 |
| TU36138 | lncRNA | upstream | 857094 | 43894185 ~ 43895951 (+) | False | G28862 |
| TU36140 | lncRNA | upstream | 857917 | 43894185 ~ 43895128 (+) | False | G28862 |
| TU36298 | lncRNA | downstream | 7846 | 44768677 ~ 44816663 (+) | True | G28991 |
| TU36303 | lncRNA | downstream | 35093 | 44795924 ~ 44798463 (+) | True | G28995 |
| TU36485 | lncRNA | downstream | 592885 | 45353716 ~ 45354079 (+) | True | G29148 |
| TU36491 | lncRNA | downstream | 617180 | 45378011 ~ 45378353 (+) | True | G29153 |
| TU36579 | lncRNA | downstream | 778938 | 45539769 ~ 45542206 (+) | True | G29223 |
| AMCG00008161 | mRNA | upstream | 4474 | 44743630 ~ 44748571 (+) | True | AMCG00008161 |
| AMCG00008162 | mRNA | upstream | 69345 | 44665636 ~ 44683700 (+) | True | AMCG00008162 |
| AMCG00008167 | mRNA | upstream | 99140 | 44577372 ~ 44653905 (+) | True | AMCG00008167 |
| AMCG00008160 | mRNA | upstream | 484722 | 44259975 ~ 44268323 (+) | True | AMCG00008160 |
| AMCG00008157 | mRNA | upstream | 621326 | 44106455 ~ 44131719 (+) | True | AMCG00008157 |
| AMCG00008168 | mRNA | downstream | 5314 | 44766145 ~ 44770112 (+) | True | AMCG00008168 |
| AMCG00008170 | mRNA | downstream | 12237 | 44773068 ~ 44774474 (+) | True | AMCG00008170 |
| AMCG00008171 | mRNA | downstream | 184921 | 44945752 ~ 44949206 (+) | True | AMCG00008171 |
| AMCG00008179 | mRNA | downstream | 237398 | 44998229 ~ 45012622 (+) | True | AMCG00008179 |
| AMCG00008178 | mRNA | downstream | 251934 | 45012765 ~ 45019906 (+) | True | AMCG00008178 |
| TU35919 | other | upstream | 1451623 | 43292596 ~ 43301422 (+) | False | AMCG00008132 |
| TU35886 | other | upstream | 1604002 | 43146773 ~ 43149043 (+) | False | AMCG00008120 |
| TU35844 | other | upstream | 1644803 | 43105713 ~ 43108242 (+) | True | G28636 |
| TU35555 | other | upstream | 2759668 | 41992859 ~ 41993377 (+) | True | G28395 |
| TU35066 | other | upstream | 4505807 | 40241312 ~ 40247238 (+) | True | AMCG00008036 |
| TU36366 | other | downstream | 262317 | 45023148 ~ 45036416 (+) | True | AMCG00008177 |
| TU36420 | other | downstream | 388598 | 45149429 ~ 45171828 (+) | True | AMCG00008185 |
| TU36476 | other | downstream | 579765 | 45340596 ~ 45343914 (+) | False | AMCG00008194 |
| TU36524 | other | downstream | 679682 | 45440513 ~ 45441064 (+) | True | G29183 |
| TU36777 | other | downstream | 1507060 | 46267891 ~ 46268327 (+) | True | G29353 |
