RNA id: AMCG00008170



Basic Information


Item Value
RNA id AMCG00008170
length 624
RNA type mRNA
GC content 0.56
exon number 4
gene id AMCG00008170
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 44773068 ~ 44774474 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAACCACGCCTCCCCATCCTCAACTCTCTGCCCCCTCTTTCAGAGTGACGTGATCATTGGGCTGGGCTGCCATGACCTGCGTGTGGCCGAGAGGTCCGCTTCCCTGTACCTGGACGGATGGGCGCCCTGGCTGCTCTTCACAGGGTACATGGGCAACCAAACTGTAGGAGTCTGGCAGCGTCCAGAGGCTGAGGTGTTCATGGAAGTGGCCCAGAAAATGGGTGTCCCCAGGGACAGGATCTTGCTGGAGACAGAAGCCACGAACACTGGAGAGAACATCAGGTTATCTTTTCATGTCCTGCTGGAGCACAATATCCCAGCCTGCAGGGTTATTCTCGTGCAGCAGCCATTCATGGAGCGCCGGGTTTTGGCTACATTTCTCCGCCAGTGGCCCGGAGAGAAGGAAAACACTCGTGCCATAGTCACCTCTCCCAGCGTCGACATGTGGGACTACCCCAACCCTGCGGTGGGCAATGCCAGCGACCTCATTTGCTACATGTTAGGGGTTGTTGAACGGATACGAGATTATCCACAGAAAGGGTTCCAAGTTGAACAAGAAATGTCGGCTGAAGTCCTCGATGCCTATCAGCGGCTCCTCCGCGCAGGCTACTCTCCCAAATAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36252 lncRNA upstream 23160 44691541 ~ 44749908 (+) True G28956
TU36226 lncRNA upstream 716460 44053965 ~ 44056608 (+) True G28931
TU36139 lncRNA upstream 877117 43894109 ~ 43895951 (+) True G28862
TU36303 lncRNA downstream 21450 44795924 ~ 44798463 (+) True G28995
TU36485 lncRNA downstream 579242 45353716 ~ 45354079 (+) True G29148
TU36491 lncRNA downstream 603537 45378011 ~ 45378353 (+) True G29153
TU36579 lncRNA downstream 765295 45539769 ~ 45542206 (+) True G29223
TU36682 lncRNA downstream 951509 45725983 ~ 45734261 (+) True G29271
AMCG00008168 mRNA upstream 2956 44766145 ~ 44770112 (+) True AMCG00008168
AMCG00008169 mRNA upstream 12237 44753045 ~ 44760831 (+) True AMCG00008169
AMCG00008161 mRNA upstream 24497 44743630 ~ 44748571 (+) True AMCG00008161
AMCG00008162 mRNA upstream 89368 44665636 ~ 44683700 (+) True AMCG00008162
AMCG00008167 mRNA upstream 119163 44577372 ~ 44653905 (+) True AMCG00008167
AMCG00008171 mRNA downstream 171278 44945752 ~ 44949206 (+) True AMCG00008171
AMCG00008179 mRNA downstream 223755 44998229 ~ 45012622 (+) True AMCG00008179
AMCG00008178 mRNA downstream 238291 45012765 ~ 45019906 (+) True AMCG00008178
AMCG00008177 mRNA downstream 248674 45023148 ~ 45036027 (+) False AMCG00008177
AMCG00008181 mRNA downstream 332939 45107413 ~ 45121480 (+) True AMCG00008181
TU35919 other upstream 1471646 43292596 ~ 43301422 (+) False AMCG00008132
TU35886 other upstream 1624025 43146773 ~ 43149043 (+) False AMCG00008120
TU35844 other upstream 1664826 43105713 ~ 43108242 (+) True G28636
TU35555 other upstream 2779691 41992859 ~ 41993377 (+) True G28395
TU35066 other upstream 4525830 40241312 ~ 40247238 (+) True AMCG00008036
TU36366 other downstream 248674 45023148 ~ 45036416 (+) True AMCG00008177
TU36420 other downstream 374955 45149429 ~ 45171828 (+) True AMCG00008185
TU36476 other downstream 566122 45340596 ~ 45343914 (+) False AMCG00008194
TU36524 other downstream 666039 45440513 ~ 45441064 (+) True G29183
TU36777 other downstream 1493417 46267891 ~ 46268327 (+) True G29353

Expression Profile