RNA id: AMCG00008185



Basic Information


Item Value
RNA id AMCG00008185
length 408
RNA type mRNA
GC content 0.69
exon number 3
gene id AMCG00008185
representative False

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 45147397 ~ 45171828 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCAGTTACATGGAGTCGCACAGGCCGCGTCCGCTGGCTTCTCAGCGCCGGTGGAGAGGGCGGGACGGATCAGCCGGGCCCCCCGCGGCCCGTGTGCTCCCTGTGCGCCCCCTGTGCGCCGCCCGGCCCCGCTGAGTCTGCTGTATCCGAGTGAAGGCGGCGCGGTGGGTCTGGCCCGGATGCCTGGACTGGAGGCGCCACGCATGGACAGACTGGCTGCGAGCCCCGCCGGGGGGCCGAGCGGCGGGCTGGAGTGGGCTCGGCCGGCCGGGGCGCCTGCGTGTCCGGGCTGCCAGCTGTCAAAGCCGCGGAGGAGATCCAGGCGCTGCACGTGTTACACTTACACAGACAAGGAGTGCGTCTATTACTGTCATCTGGACATCATCTGGATCAACACTCCGGAGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36298 lncRNA upstream 330734 44768677 ~ 44816663 (+) True G28991
TU36303 lncRNA upstream 348934 44795924 ~ 44798463 (+) True G28995
TU36252 lncRNA upstream 397489 44691541 ~ 44749908 (+) True G28956
TU36226 lncRNA upstream 1090789 44053965 ~ 44056608 (+) True G28931
TU36138 lncRNA upstream 1251446 43894185 ~ 43895951 (+) False G28862
TU36485 lncRNA downstream 202380 45353716 ~ 45354079 (+) True G29148
TU36491 lncRNA downstream 226675 45378011 ~ 45378353 (+) True G29153
TU36579 lncRNA downstream 388433 45539769 ~ 45542206 (+) True G29223
TU36682 lncRNA downstream 574647 45725983 ~ 45734261 (+) True G29271
TU36703 lncRNA downstream 736613 45887949 ~ 45888412 (+) True G29291
AMCG00008181 mRNA upstream 25917 45107413 ~ 45121480 (+) True AMCG00008181
AMCG00008177 mRNA upstream 111370 45023148 ~ 45036027 (+) False AMCG00008177
AMCG00008178 mRNA upstream 127491 45012765 ~ 45019906 (+) True AMCG00008178
AMCG00008179 mRNA upstream 134775 44998229 ~ 45012622 (+) True AMCG00008179
AMCG00008171 mRNA upstream 198191 44945752 ~ 44949206 (+) True AMCG00008171
AMCG00008188 mRNA downstream 77306 45228642 ~ 45232701 (+) True AMCG00008188
AMCG00008186 mRNA downstream 88602 45239938 ~ 45242352 (+) True AMCG00008186
AMCG00008187 mRNA downstream 94617 45245953 ~ 45269832 (+) True AMCG00008187
AMCG00008193 mRNA downstream 176827 45328163 ~ 45336254 (+) True AMCG00008193
AMCG00008194 mRNA downstream 189238 45340574 ~ 45343865 (+) True AMCG00008194
TU36366 other upstream 110981 45023148 ~ 45036416 (+) True AMCG00008177
TU35919 other upstream 1845975 43292596 ~ 43301422 (+) False AMCG00008132
TU35886 other upstream 1998354 43146773 ~ 43149043 (+) False AMCG00008120
TU35844 other upstream 2039155 43105713 ~ 43108242 (+) True G28636
TU35555 other upstream 3154020 41992859 ~ 41993377 (+) True G28395
TU36476 other downstream 189260 45340596 ~ 45343914 (+) False AMCG00008194
TU36524 other downstream 289177 45440513 ~ 45441064 (+) True G29183
TU36777 other downstream 1116555 46267891 ~ 46268327 (+) True G29353
TU36848 other downstream 2428877 47580213 ~ 47586235 (+) True G29418
TU36851 other downstream 2443768 47595104 ~ 47595686 (+) True G29421

Expression Profile