RNA id: AMCG00008191


Basic Information

Item Value
RNA id AMCG00008191
length 396
RNA type mRNA
GC content 0.48
exon number 5
gene id AMCG00008191
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 45233389 ~ 45234479 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGACGAGACCCAGAAAGTCCTGCAGTATTTGACCGAGGTGGAGGAGGCAGCAGAGGATGTTTTAGCCGACAAACAACAGATTGTAGATCTGGACGTGAAGCGAAACAGGAACAGAGAGGCGCTCGCTGCACTGCACAGGGACAGGGATGAAGCAGACAAAGTAAAAGTTTGTTTTGGGAACATGTTCATAAAGTTACCAAGAACCACCACCAAGCAGATGATTCAGAAAGACCAGGAGCAGCTGGACAAGGAGATAAATGATCTGCGGAAACGTTTGAAAGCAAAAGTGAACCGCCTCAATGAGTTGCAAGGGAAGCCGGAGCTGACAGGATACAACCTTTCTCCCTTGTCCACTGAGGAGCTGAAGTCCATCAACAAGATTTTGGGGAGATGA

Function

GO:

id name namespace
GO:0006457 protein folding biological_process
GO:0016272 prefoldin complex cellular_component
GO:0051082 unfolded protein binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36439 lncRNA downstream 82062 45149501 ~ 45151327 (-) False AMCG00008192
TU36401 lncRNA downstream 196976 45034445 ~ 45036413 (-) True G29081
TU36275 lncRNA downstream 545214 44682437 ~ 44688175 (-) True G28976
TU36278 lncRNA downstream 551620 44681425 ~ 44681769 (-) True G28978
TU36277 lncRNA downstream 553347 44679816 ~ 44680042 (-) True G28977
TU36509 lncRNA upstream 119328 45353807 ~ 45354086 (-) True G29170
TU36523 lncRNA upstream 185111 45419590 ~ 45420462 (-) True G29182
TU36533 lncRNA upstream 227300 45461779 ~ 45462530 (-) True G29192
TU36551 lncRNA upstream 255528 45490007 ~ 45490890 (-) True G29206
TU36650 lncRNA upstream 365080 45599559 ~ 45714037 (-) True G29249
AMCG00008192 mRNA downstream 4885 45151032 ~ 45228504 (-) True AMCG00008192
AMCG00008184 mRNA downstream 137438 45092784 ~ 45095951 (-) True AMCG00008184
AMCG00008182 mRNA downstream 141269 45087197 ~ 45092120 (-) True AMCG00008182
AMCG00008183 mRNA downstream 162418 45062781 ~ 45070971 (-) True AMCG00008183
AMCG00008180 mRNA downstream 235473 44997485 ~ 44997916 (-) True AMCG00008180
AMCG00008190 mRNA upstream 580 45235059 ~ 45239415 (-) True AMCG00008190
AMCG00008189 mRNA upstream 37936 45272415 ~ 45280354 (-) True AMCG00008189
AMCG00008196 mRNA upstream 60821 45295300 ~ 45302966 (-) True AMCG00008196
AMCG00008197 mRNA upstream 102975 45337454 ~ 45339881 (-) True AMCG00008197
AMCG00008195 mRNA upstream 109700 45344179 ~ 45350087 (-) True AMCG00008195
TU36269 other downstream 815193 44417874 ~ 44418196 (-) True G28970
TU35782 other downstream 2468735 42761004 ~ 42764654 (-) True G28581
TU35536 other downstream 3383499 41846933 ~ 41849890 (-) True AMCG00008085
TU35381 other downstream 4031564 41199489 ~ 41201825 (-) True AMCG00008069
TU35307 other downstream 4216141 41016159 ~ 41017248 (-) True G28202
TU36715 other upstream 816216 46050695 ~ 46054346 (-) True G29301
TU36785 other upstream 1246467 46480946 ~ 46481898 (-) True G29361
TU36922 other upstream 2479455 47713934 ~ 47918462 (-) True AMCG00008245
TU36999 other upstream 2889446 48123925 ~ 48124682 (-) True G29544
TU37036 other upstream 3046863 48281342 ~ 48283213 (-) False AMCG00008256

Expression Profile