RNA id: AMCG00008204



Basic Information


Item Value
RNA id AMCG00008204
length 444
RNA type mRNA
GC content 0.51
exon number 5
gene id AMCG00008204
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 45416277 ~ 45423427 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGATGCACACATTCCTGATACCCCCGCTTTTATTCACTGTCAACTTGACAGGAGAAAACCACAGCCAGGTCGCCAATGACAGCACCCCCCAAAGGGACATCACAGAGAAGCGAACAGGAAGGCACGCCGATGCTATCTTCACAAACAGCTACAGGAAGGTTCTGGGCCAGATATCTGCCAGGAAGTTCCTTCAGACCATCATGGGAAAGCGGCTGGGCAAAGAGAGCTCAGAGACGACTATGAAAACTGCTAAACGACAGACAGGCATGTATGCAGACACCTACAGACAGGCTCTCACCACTATTGAGAGGAAGCAGCGATACAGGGGGCGGCTGGGACTGGACAGACCAAGGCTCCTATACTTTGCCAATCTACAACTCTGCTCTGCAGCAATCCtgaaagaggaggagagaaagaagaaagaggCAGGGATACAGGGTTAA

Function


GO: NA

KEGG:

id description
K05260 GHRH; growth hormone-releasing hormone

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36491 lncRNA upstream 37924 45378011 ~ 45378353 (+) True G29153
TU36485 lncRNA upstream 62198 45353716 ~ 45354079 (+) True G29148
TU36298 lncRNA upstream 599614 44768677 ~ 44816663 (+) True G28991
TU36303 lncRNA upstream 617814 44795924 ~ 44798463 (+) True G28995
TU36252 lncRNA upstream 666369 44691541 ~ 44749908 (+) True G28956
TU36579 lncRNA downstream 116342 45539769 ~ 45542206 (+) True G29223
TU36682 lncRNA downstream 302556 45725983 ~ 45734261 (+) True G29271
TU36703 lncRNA downstream 464522 45887949 ~ 45888412 (+) True G29291
TU36736 lncRNA downstream 669481 46092908 ~ 46093489 (+) True G29320
TU36779 lncRNA downstream 845248 46268675 ~ 46268989 (+) True G29355
AMCG00008200 mRNA upstream 7814 45400869 ~ 45408463 (+) True AMCG00008200
AMCG00008199 mRNA upstream 16409 45375965 ~ 45399868 (+) True AMCG00008199
AMCG00008194 mRNA upstream 72412 45340574 ~ 45343865 (+) True AMCG00008194
AMCG00008193 mRNA upstream 80023 45328163 ~ 45336254 (+) True AMCG00008193
AMCG00008187 mRNA upstream 146445 45245953 ~ 45269832 (+) True AMCG00008187
AMCG00008205 mRNA downstream 20511 45443938 ~ 45468459 (+) True AMCG00008205
AMCG00008198 mRNA downstream 61203 45484630 ~ 45486967 (+) True AMCG00008198
AMCG00008210 mRNA downstream 65205 45488632 ~ 45488966 (+) True AMCG00008210
AMCG00008211 mRNA downstream 175773 45599200 ~ 45638789 (+) True AMCG00008211
AMCG00008212 mRNA downstream 285141 45708568 ~ 45714043 (+) True AMCG00008212
TU36476 other upstream 72363 45340596 ~ 45343914 (+) False AMCG00008194
TU36420 other upstream 244449 45149429 ~ 45171828 (+) True AMCG00008185
TU36366 other upstream 379861 45023148 ~ 45036416 (+) True AMCG00008177
TU35919 other upstream 2114855 43292596 ~ 43301422 (+) False AMCG00008132
TU35886 other upstream 2267234 43146773 ~ 43149043 (+) False AMCG00008120
TU36524 other downstream 17086 45440513 ~ 45441064 (+) True G29183
TU36777 other downstream 844464 46267891 ~ 46268327 (+) True G29353
TU36848 other downstream 2156786 47580213 ~ 47586235 (+) True G29418
TU36851 other downstream 2171677 47595104 ~ 47595686 (+) True G29421
TU36868 other downstream 2203869 47627296 ~ 47671421 (+) False AMCG00008232

Expression Profile