RNA id: AMCG00008226


Basic Information

Item Value
RNA id AMCG00008226
length 309
RNA type mRNA
GC content 0.61
exon number 1
gene id AMCG00008226
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 46530450 ~ 46530758 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAGACCGCCCTGCACCTGCTGTGTGTGGGGGCCCAAAACCACGCGGTCCCACCAGGCAGAGCAGTGCCAGGCCAACTGCCTGCAGATGATCGTGAAGTGGACCGGCGCCAAGCTGGACTGTGGGGAGTACGAGCGGGTGGACATCCATGCCATGGACAATAAGAAGAGCCCTGCACTACGCCAAGAAGCATCATCATCCTGGCGGCATATGGTTTTCTCCAGGGACCCTGAGGCAGAGAATATTGAGGCCCTGGGCAGGAGAGAGGTACTGGCGTCCGGGGTGAGGGTGCAGAGGGGGGCTGGCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36782 lncRNA upstream 51676 46478492 ~ 46478774 (+) True G29358
TU36779 lncRNA upstream 261461 46268675 ~ 46268989 (+) True G29355
TU36736 lncRNA upstream 436961 46092908 ~ 46093489 (+) True G29320
TU36703 lncRNA upstream 642038 45887949 ~ 45888412 (+) True G29291
TU36682 lncRNA upstream 796189 45725983 ~ 45734261 (+) True G29271
TU36800 lncRNA downstream 4209 46534967 ~ 46535184 (+) True G29372
TU36804 lncRNA downstream 192875 46723633 ~ 46723895 (+) True G29376
TU36815 lncRNA downstream 507706 47038464 ~ 47038892 (+) True G29387
TU36833 lncRNA downstream 881601 47412359 ~ 47412566 (+) True G29404
TU36841 lncRNA downstream 1034583 47565341 ~ 47565553 (+) True G29412
AMCG00008221 mRNA upstream 399433 46124130 ~ 46131017 (+) True AMCG00008221
AMCG00008220 mRNA upstream 439457 46077307 ~ 46090993 (+) True AMCG00008220
AMCG00008219 mRNA upstream 461632 46039948 ~ 46068818 (+) True AMCG00008219
AMCG00008218 mRNA upstream 618843 45867343 ~ 45911607 (+) True AMCG00008218
AMCG00008212 mRNA upstream 816407 45708568 ~ 45714043 (+) True AMCG00008212
AMCG00008232 mRNA downstream 1092194 47622952 ~ 47633651 (+) False AMCG00008232
AMCG00008238 mRNA downstream 1183575 47714333 ~ 47716582 (+) True AMCG00008238
AMCG00008239 mRNA downstream 1270340 47801098 ~ 47813090 (+) True AMCG00008239
AMCG00008242 mRNA downstream 1359224 47889982 ~ 47892071 (+) True AMCG00008242
AMCG00008243 mRNA downstream 1365160 47895918 ~ 47908312 (+) True AMCG00008243
TU36777 other upstream 262123 46267891 ~ 46268327 (+) True G29353
TU36524 other upstream 1089386 45440513 ~ 45441064 (+) True G29183
TU36476 other upstream 1186536 45340596 ~ 45343914 (+) False AMCG00008194
TU36420 other upstream 1358622 45149429 ~ 45171828 (+) True AMCG00008185
TU36366 other upstream 1494034 45023148 ~ 45036416 (+) True AMCG00008177
TU36848 other downstream 1049455 47580213 ~ 47586235 (+) True G29418
TU36851 other downstream 1064346 47595104 ~ 47595686 (+) True G29421
TU36868 other downstream 1096538 47627296 ~ 47671421 (+) False AMCG00008232
TU36872 other downstream 1101432 47632190 ~ 47637376 (+) True AMCG00008232
TU36882 other downstream 1133759 47664517 ~ 47715537 (+) False AMCG00008238