Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00008238 |
| length | 1218 |
| RNA type | mRNA |
| GC content | 0.58 |
| exon number | 2 |
| gene id | AMCG00008238 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 47664517 ~ 47716582 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0048593 | camera-type eye morphogenesis | biological_process |
| GO:0009408 | response to heat | biological_process |
| GO:0009410 | response to xenobiotic stimulus | biological_process |
| GO:0046686 | response to cadmium ion | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU36861 | lncRNA | upstream | 98402 | 47613501 ~ 47615931 (+) | True | G29431 |
| TU36855 | lncRNA | upstream | 107908 | 47605140 ~ 47606425 (+) | True | G29425 |
| TU36854 | lncRNA | upstream | 111647 | 47602218 ~ 47602686 (+) | True | G29424 |
| TU36853 | lncRNA | upstream | 113232 | 47600820 ~ 47601101 (+) | True | G29423 |
| TU36852 | lncRNA | upstream | 114865 | 47599234 ~ 47599468 (+) | True | G29422 |
| TU36952 | lncRNA | downstream | 220384 | 47936966 ~ 47941754 (+) | True | AMCG00008249 |
| TU36951 | lncRNA | downstream | 220808 | 47937390 ~ 47941754 (+) | False | AMCG00008249 |
| TU37001 | lncRNA | downstream | 419887 | 48136469 ~ 48136724 (+) | True | G29546 |
| TU37075 | lncRNA | downstream | 698421 | 48415003 ~ 48419063 (+) | True | G29612 |
| TU37081 | lncRNA | downstream | 712393 | 48428975 ~ 48429218 (+) | True | G29615 |
| AMCG00008232 | mRNA | upstream | 80682 | 47622952 ~ 47633651 (+) | False | AMCG00008232 |
| AMCG00008226 | mRNA | upstream | 1183575 | 46530450 ~ 46530758 (+) | True | AMCG00008226 |
| AMCG00008221 | mRNA | upstream | 1583316 | 46124130 ~ 46131017 (+) | True | AMCG00008221 |
| AMCG00008220 | mRNA | upstream | 1623340 | 46077307 ~ 46090993 (+) | True | AMCG00008220 |
| AMCG00008219 | mRNA | upstream | 1645515 | 46039948 ~ 46068818 (+) | True | AMCG00008219 |
| AMCG00008239 | mRNA | downstream | 84516 | 47801098 ~ 47813090 (+) | True | AMCG00008239 |
| AMCG00008242 | mRNA | downstream | 173400 | 47889982 ~ 47892071 (+) | True | AMCG00008242 |
| AMCG00008243 | mRNA | downstream | 179336 | 47895918 ~ 47908312 (+) | True | AMCG00008243 |
| AMCG00008241 | mRNA | downstream | 199364 | 47915946 ~ 47918128 (+) | True | AMCG00008241 |
| AMCG00008249 | mRNA | downstream | 213085 | 47929667 ~ 47939861 (+) | False | AMCG00008249 |
| TU36868 | other | upstream | 42912 | 47627296 ~ 47671421 (+) | False | AMCG00008232 |
| TU36872 | other | upstream | 76957 | 47632190 ~ 47637376 (+) | True | AMCG00008232 |
| TU36851 | other | upstream | 118647 | 47595104 ~ 47595686 (+) | True | G29421 |
| TU36848 | other | upstream | 128098 | 47580213 ~ 47586235 (+) | True | G29418 |
| TU36777 | other | upstream | 1446006 | 46267891 ~ 46268327 (+) | True | G29353 |
| TU36905 | other | downstream | 146987 | 47863569 ~ 47890683 (+) | False | AMCG00008242 |
| TU36904 | other | downstream | 172445 | 47889027 ~ 47890683 (+) | False | AMCG00008242 |
| TU36912 | other | downstream | 197286 | 47913868 ~ 47916257 (+) | False | AMCG00008241 |
| TU37226 | other | downstream | 1447234 | 49163816 ~ 49171017 (+) | True | AMCG00008263 |
| TU37330 | other | downstream | 1688274 | 49404856 ~ 49418746 (+) | True | AMCG00008271 |
