Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00008247 |
| length | 1165 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 7 |
| gene id | AMCG00008247 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 48015100 ~ 48030729 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0035269 | protein O-linked mannosylation | biological_process |
| GO:0006506 | GPI anchor biosynthetic process | biological_process |
| GO:0005789 | endoplasmic reticulum membrane | cellular_component |
| GO:0004169 | dolichyl-phosphate-mannose-protein mannosyltransferase activity | molecular_function |
| GO:0004582 | dolichyl-phosphate beta-D-mannosyltransferase activity | molecular_function |
| id | description |
|---|---|
| K00721 | DPM1; dolichol-phosphate mannosyltransferase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU36952 | lncRNA | upstream | 73346 | 47936966 ~ 47941754 (+) | True | AMCG00008249 |
| TU36951 | lncRNA | upstream | 73346 | 47937390 ~ 47941754 (+) | False | AMCG00008249 |
| TU36861 | lncRNA | upstream | 399169 | 47613501 ~ 47615931 (+) | True | G29431 |
| TU36855 | lncRNA | upstream | 408675 | 47605140 ~ 47606425 (+) | True | G29425 |
| TU36854 | lncRNA | upstream | 412414 | 47602218 ~ 47602686 (+) | True | G29424 |
| TU37001 | lncRNA | downstream | 105740 | 48136469 ~ 48136724 (+) | True | G29546 |
| TU37075 | lncRNA | downstream | 384274 | 48415003 ~ 48419063 (+) | True | G29612 |
| TU37081 | lncRNA | downstream | 398246 | 48428975 ~ 48429218 (+) | True | G29615 |
| TU37131 | lncRNA | downstream | 643519 | 48674248 ~ 48676139 (+) | True | G29661 |
| TU37145 | lncRNA | downstream | 731243 | 48761972 ~ 48762297 (+) | True | G29675 |
| AMCG00008248 | mRNA | upstream | 13160 | 47955034 ~ 48001940 (+) | True | AMCG00008248 |
| AMCG00008249 | mRNA | upstream | 75239 | 47929667 ~ 47939861 (+) | False | AMCG00008249 |
| AMCG00008241 | mRNA | upstream | 96972 | 47915946 ~ 47918128 (+) | True | AMCG00008241 |
| AMCG00008243 | mRNA | upstream | 106788 | 47895918 ~ 47908312 (+) | True | AMCG00008243 |
| AMCG00008242 | mRNA | upstream | 123029 | 47889982 ~ 47892071 (+) | True | AMCG00008242 |
| AMCG00008246 | mRNA | downstream | 12017 | 48042746 ~ 48067543 (+) | True | AMCG00008246 |
| AMCG00008251 | mRNA | downstream | 204958 | 48235687 ~ 48275348 (+) | True | AMCG00008251 |
| AMCG00008252 | mRNA | downstream | 261910 | 48292639 ~ 48326138 (+) | True | AMCG00008252 |
| AMCG00008253 | mRNA | downstream | 317018 | 48347747 ~ 48376071 (+) | True | AMCG00008253 |
| AMCG00008250 | mRNA | downstream | 431564 | 48462293 ~ 48474532 (+) | True | AMCG00008250 |
| TU36912 | other | upstream | 98843 | 47913868 ~ 47916257 (+) | False | AMCG00008241 |
| TU36905 | other | upstream | 124417 | 47863569 ~ 47890683 (+) | False | AMCG00008242 |
| TU36904 | other | upstream | 124417 | 47889027 ~ 47890683 (+) | False | AMCG00008242 |
| TU36882 | other | upstream | 299563 | 47664517 ~ 47715537 (+) | False | AMCG00008238 |
| TU36872 | other | upstream | 377724 | 47632190 ~ 47637376 (+) | True | AMCG00008232 |
| TU37226 | other | downstream | 1133087 | 49163816 ~ 49171017 (+) | True | AMCG00008263 |
| TU37330 | other | downstream | 1374127 | 49404856 ~ 49418746 (+) | True | AMCG00008271 |
| TU37559 | other | downstream | 2320798 | 50351527 ~ 50352794 (+) | False | AMCG00008288 |
| TU37728 | other | downstream | 3395852 | 51426581 ~ 51428055 (+) | True | G30166 |
| TU37800 | other | downstream | 4070033 | 52100762 ~ 52101524 (+) | True | G30232 |
