Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00008254 |
| length | 1281 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 6 |
| gene id | AMCG00008254 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 48042673 ~ 48202462 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0016324 | apical plasma membrane | cellular_component |
| id | description |
|---|---|
| K06093 | PARD6; partitioning defective protein 6 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU36985 | lncRNA | downstream | 11760 | 48027717 ~ 48030913 (-) | True | G29530 |
| TU36976 | lncRNA | downstream | 29718 | 48008657 ~ 48012955 (-) | True | G29521 |
| TU36921 | lncRNA | downstream | 124211 | 47666642 ~ 47918462 (-) | False | AMCG00008245 |
| TU36925 | lncRNA | downstream | 124211 | 47666642 ~ 47918462 (-) | False | AMCG00008245 |
| TU36924 | lncRNA | downstream | 151990 | 47713934 ~ 47890683 (-) | False | AMCG00008245 |
| TU37044 | lncRNA | upstream | 92591 | 48295053 ~ 48297299 (-) | True | G29583 |
| TU37057 | lncRNA | upstream | 129646 | 48332108 ~ 48332942 (-) | True | G29595 |
| TU37077 | lncRNA | upstream | 212541 | 48415003 ~ 48418903 (-) | False | AMCG00008255 |
| TU37078 | lncRNA | upstream | 212541 | 48415003 ~ 48418903 (-) | False | AMCG00008255 |
| TU37079 | lncRNA | upstream | 212541 | 48415003 ~ 48418903 (-) | True | AMCG00008255 |
| AMCG00008245 | mRNA | downstream | 124561 | 47916071 ~ 47918112 (-) | False | AMCG00008245 |
| AMCG00008244 | mRNA | downstream | 155374 | 47882297 ~ 47887299 (-) | True | AMCG00008244 |
| AMCG00008240 | mRNA | downstream | 250152 | 47783301 ~ 47792521 (-) | True | AMCG00008240 |
| AMCG00008237 | mRNA | downstream | 300311 | 47717707 ~ 47742362 (-) | True | AMCG00008237 |
| AMCG00008236 | mRNA | downstream | 365923 | 47642979 ~ 47676750 (-) | True | AMCG00008236 |
| AMCG00008256 | mRNA | upstream | 159 | 48202621 ~ 48291443 (-) | True | AMCG00008256 |
| AMCG00008255 | mRNA | upstream | 208623 | 48411085 ~ 48418933 (-) | False | AMCG00008255 |
| AMCG00008258 | mRNA | upstream | 281933 | 48484395 ~ 48643942 (-) | True | AMCG00008258 |
| AMCG00008257 | mRNA | upstream | 472066 | 48674528 ~ 48697834 (-) | True | AMCG00008257 |
| AMCG00008260 | mRNA | upstream | 635686 | 48838148 ~ 48839345 (-) | True | AMCG00008260 |
| TU36922 | other | downstream | 124211 | 47713934 ~ 47918462 (-) | True | AMCG00008245 |
| TU36785 | other | downstream | 1560775 | 46480946 ~ 46481898 (-) | True | G29361 |
| TU36715 | other | downstream | 1988327 | 46050695 ~ 46054346 (-) | True | G29301 |
| TU36269 | other | downstream | 3624477 | 44417874 ~ 44418196 (-) | True | G28970 |
| TU35782 | other | downstream | 5278019 | 42761004 ~ 42764654 (-) | True | G28581 |
| TU37036 | other | upstream | 78880 | 48281342 ~ 48283213 (-) | False | AMCG00008256 |
| TU37454 | other | upstream | 1593509 | 49795971 ~ 49900951 (-) | True | G29928 |
| TU37508 | other | upstream | 1851363 | 50053825 ~ 50054102 (-) | True | G29974 |
| TU37591 | other | upstream | 2071276 | 50273738 ~ 50274183 (-) | True | G30054 |
| TU37623 | other | upstream | 2321525 | 50523987 ~ 50528036 (-) | True | AMCG00008298 |
