RNA id: TU37266



Basic Information


Item Value
RNA id TU37266
length 330
lncRNA type sense_over
GC content 0.48
exon number 3
gene id AMCG00008264
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 49175725 ~ 49253244 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCAAAGAAGGCAGGGAAGTTTCCAGCCTTTGTTACACCGAAGAGCTGCTGCATTGTAACAAGTGGACGCAAGAAACTACAATTATCGCATGGCTAAGGTGTTATGAGAGCTGTGGTGATGAAAAGATGATGGAGGTGGAGTCGGCATATTCAGATTTTATCACCTGTGATCGTACTGGTCGCAGGAATGCGGTGCCTGACATCAAAGGTGAAGGGACGGTGGTGGGGACAAGCGAGTTAACCAAAGACATGGCTCAGATGGACCTAAAAGTGCTAGgtCAGGGCAGCTCTAATCAACACCTCCAATCTCGTCTCATTGATTGGAGTCAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37201 lncRNA downstream 215425 48967038 ~ 48967343 (-) True G29723
TU37192 lncRNA downstream 242669 48924113 ~ 48940099 (-) True G29717
TU37166 lncRNA downstream 340155 48842351 ~ 48842613 (-) True G29695
TU37165 lncRNA downstream 348946 48833539 ~ 48833822 (-) True G29694
TU37146 lncRNA downstream 420471 48761972 ~ 48762297 (-) True G29676
TU37301 lncRNA upstream 75329 49328573 ~ 49328840 (-) True G29806
TU37324 lncRNA upstream 146925 49400169 ~ 49400479 (-) True G29825
TU37325 lncRNA upstream 147406 49400650 ~ 49400872 (-) True G29826
TU37326 lncRNA upstream 148805 49402049 ~ 49402258 (-) True G29827
TU37338 lncRNA upstream 158112 49411356 ~ 49417214 (-) True G29834
AMCG00008261 mRNA downstream 13223 49144173 ~ 49169545 (-) True AMCG00008261
AMCG00008259 mRNA downstream 321164 48860155 ~ 48861604 (-) True AMCG00008259
AMCG00008260 mRNA downstream 343423 48838148 ~ 48839345 (-) True AMCG00008260
AMCG00008257 mRNA downstream 484934 48674528 ~ 48697834 (-) True AMCG00008257
AMCG00008258 mRNA downstream 538826 48484395 ~ 48643942 (-) True AMCG00008258
AMCG00008265 mRNA upstream 16376 49269620 ~ 49280998 (-) True AMCG00008265
AMCG00008266 mRNA upstream 46289 49299533 ~ 49324003 (-) True AMCG00008266
AMCG00008267 mRNA upstream 92244 49345488 ~ 49361511 (-) True AMCG00008267
AMCG00008269 mRNA upstream 160148 49413392 ~ 49415125 (-) True AMCG00008269
AMCG00008268 mRNA upstream 225089 49478333 ~ 49479077 (-) True AMCG00008268
TU37036 other downstream 899555 48281342 ~ 48283213 (-) False AMCG00008256
TU36999 other downstream 1058086 48123925 ~ 48124682 (-) True G29544
TU36922 other downstream 1264306 47713934 ~ 47918462 (-) True AMCG00008245
TU36785 other downstream 2700870 46480946 ~ 46481898 (-) True G29361
TU36715 other downstream 3128422 46050695 ~ 46054346 (-) True G29301
TU37454 other upstream 542727 49795971 ~ 49900951 (-) True G29928
TU37508 other upstream 800581 50053825 ~ 50054102 (-) True G29974
TU37591 other upstream 1020494 50273738 ~ 50274183 (-) True G30054
TU37623 other upstream 1270743 50523987 ~ 50528036 (-) True AMCG00008298

Expression Profile