RNA id: AMCG00008268


Basic Information

Item Value
RNA id AMCG00008268
length 495
RNA type mRNA
GC content 0.48
exon number 2
gene id AMCG00008268
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 49478333 ~ 49479077 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAGGCTGTTTGTTGACCATGTGCTTTGTGTCCAGGCTAAGATTCTGGACCACGATAACGTGAACTACCTAAAGAAGATCCTCAGCGAGCTCGCCATGGTGCTCGATCAAGTGGAAGCTGAACTGGAGAAGAGGAAACTAGAATACCAAGGTAAAAAGTGTGAGTTGTGGCTGTGTGGACCCGAGTTTACCTTAGCCGATATTTCGCTAGGAGCCATGCTGCACCGCCTCAAATTCTTGggactttcaaataaatactggGAGGAAGGGAGCCGGCCCAATATACAGTCTTTTTTTGAGCGCGTGCAGAAACGCTACGCTTTCCGCAAAGTGCTTGGAGACATCCATACAACGCTGCTCTCCGCCGTCCTACCAAACGCATTTCGAATGGTGAAAAGAAAGCCCCCCTCCTTCTTCGGAGCCTCTTTCCTCATGGGGTCCCTGGGCGGAATGGGATATTTTGCCTAttggtatttaaaaaagaaatatatgtaG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37338 lncRNA downstream 61119 49411356 ~ 49417214 (-) True G29834
TU37326 lncRNA downstream 76075 49402049 ~ 49402258 (-) True G29827
TU37325 lncRNA downstream 77461 49400650 ~ 49400872 (-) True G29826
TU37324 lncRNA downstream 77854 49400169 ~ 49400479 (-) True G29825
TU37301 lncRNA downstream 149493 49328573 ~ 49328840 (-) True G29806
TU37418 lncRNA upstream 36407 49515484 ~ 49588805 (-) True G29899
TU37411 lncRNA upstream 45665 49524742 ~ 49537281 (-) True AMCG00008273
TU37412 lncRNA upstream 46164 49525241 ~ 49537281 (-) False AMCG00008273
TU37419 lncRNA upstream 106809 49585886 ~ 49588805 (-) False G29899
TU37426 lncRNA upstream 113201 49592278 ~ 49621960 (-) True G29904
AMCG00008269 mRNA downstream 63208 49413392 ~ 49415125 (-) True AMCG00008269
AMCG00008267 mRNA downstream 116822 49345488 ~ 49361511 (-) True AMCG00008267
AMCG00008266 mRNA downstream 154330 49299533 ~ 49324003 (-) True AMCG00008266
AMCG00008265 mRNA downstream 197335 49269620 ~ 49280998 (-) True AMCG00008265
AMCG00008264 mRNA downstream 226434 49175725 ~ 49251899 (-) False AMCG00008264
AMCG00008273 mRNA upstream 18323 49497400 ~ 49537179 (-) False AMCG00008273
AMCG00008274 mRNA upstream 174493 49653570 ~ 49661750 (-) True AMCG00008274
AMCG00008275 mRNA upstream 230789 49709866 ~ 49711609 (-) True AMCG00008275
AMCG00008277 mRNA upstream 259978 49739055 ~ 49752628 (-) True AMCG00008277
AMCG00008276 mRNA upstream 294037 49773114 ~ 49775968 (-) True AMCG00008276
TU37036 other downstream 1195120 48281342 ~ 48283213 (-) False AMCG00008256
TU36999 other downstream 1353651 48123925 ~ 48124682 (-) True G29544
TU36922 other downstream 1559871 47713934 ~ 47918462 (-) True AMCG00008245
TU36785 other downstream 2996435 46480946 ~ 46481898 (-) True G29361
TU36715 other downstream 3423987 46050695 ~ 46054346 (-) True G29301
TU37454 other upstream 316894 49795971 ~ 49900951 (-) True G29928
TU37508 other upstream 574748 50053825 ~ 50054102 (-) True G29974
TU37591 other upstream 794661 50273738 ~ 50274183 (-) True G30054
TU37623 other upstream 1044910 50523987 ~ 50528036 (-) True AMCG00008298

Expression Profile