RNA id: AMCG00008269


Basic Information

Item Value
RNA id AMCG00008269
length 366
RNA type mRNA
GC content 0.52
exon number 3
gene id AMCG00008269
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 49413392 ~ 49415125 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTGTGGGACCAAAGACTAGCGAAATCTGCAGAAGCATGGGCGACACAGTGTATCTGGGACCATGGACCACCCCAGCTTATGCGCTATATGGGCCAAAACCTGTCCATTCATTCTGGGAGATACCGGTCAGTAATTGAGCTGGTGAGGTCATGGTACGATGAGAGACAATTCTATTCCTTCCCATATCCCCACGAGTGCAACCCCAGCTGTCCCAATAAGTGCAGTGGCTCAGTGTGCTCCCATTACACACAGATGGTCTGGGCCAGTTCCAACAGGATCGGATGTGCCATCAACAGATGCTCCAACATGAATGTGTGGGGCAGTACATGGCGCCAGGCCATCTTTCTGGTGTGCAACTACTCCATC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37326 lncRNA downstream 11134 49402049 ~ 49402258 (-) True G29827
TU37325 lncRNA downstream 12520 49400650 ~ 49400872 (-) True G29826
TU37324 lncRNA downstream 12913 49400169 ~ 49400479 (-) True G29825
TU37301 lncRNA downstream 84552 49328573 ~ 49328840 (-) True G29806
TU37266 lncRNA downstream 160148 49182768 ~ 49253244 (-) True AMCG00008264
TU37418 lncRNA upstream 100359 49515484 ~ 49588805 (-) True G29899
TU37411 lncRNA upstream 109617 49524742 ~ 49537281 (-) True AMCG00008273
TU37412 lncRNA upstream 110116 49525241 ~ 49537281 (-) False AMCG00008273
TU37419 lncRNA upstream 170761 49585886 ~ 49588805 (-) False G29899
TU37426 lncRNA upstream 177153 49592278 ~ 49621960 (-) True G29904
AMCG00008267 mRNA downstream 51881 49345488 ~ 49361511 (-) True AMCG00008267
AMCG00008266 mRNA downstream 89389 49299533 ~ 49324003 (-) True AMCG00008266
AMCG00008265 mRNA downstream 132394 49269620 ~ 49280998 (-) True AMCG00008265
AMCG00008264 mRNA downstream 161493 49175725 ~ 49251899 (-) False AMCG00008264
AMCG00008261 mRNA downstream 243847 49144173 ~ 49169545 (-) True AMCG00008261
AMCG00008268 mRNA upstream 63208 49478333 ~ 49479077 (-) True AMCG00008268
AMCG00008273 mRNA upstream 82275 49497400 ~ 49537179 (-) False AMCG00008273
AMCG00008274 mRNA upstream 238445 49653570 ~ 49661750 (-) True AMCG00008274
AMCG00008275 mRNA upstream 294741 49709866 ~ 49711609 (-) True AMCG00008275
AMCG00008277 mRNA upstream 323930 49739055 ~ 49752628 (-) True AMCG00008277
TU37036 other downstream 1130179 48281342 ~ 48283213 (-) False AMCG00008256
TU36999 other downstream 1288710 48123925 ~ 48124682 (-) True G29544
TU36922 other downstream 1494930 47713934 ~ 47918462 (-) True AMCG00008245
TU36785 other downstream 2931494 46480946 ~ 46481898 (-) True G29361
TU36715 other downstream 3359046 46050695 ~ 46054346 (-) True G29301
TU37454 other upstream 380846 49795971 ~ 49900951 (-) True G29928
TU37508 other upstream 638700 50053825 ~ 50054102 (-) True G29974
TU37591 other upstream 858613 50273738 ~ 50274183 (-) True G30054
TU37623 other upstream 1108862 50523987 ~ 50528036 (-) True AMCG00008298

Expression Profile