RNA id: AMCG00008298


Basic Information

Item Value
RNA id AMCG00008298
length 258
RNA type mRNA
GC content 0.58
exon number 2
gene id AMCG00008298
representative False

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 50523987 ~ 50528036 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCCACGGAACTGGACCTTTCGCCCCCGGACGTCCCGGAGCCGACCTTCCTGGAAAGTGTCCTGCGCTACGGCCTGTTCCTGGGCGCCCTGTTCCAGCTTGTCTGCATCCTTGCCATAATTATCCCTTCTTCCAAGGCACACGACCAGGAGGCTGAACCCCATGATATGCGCGGCGCTGAGCAGAGCCGAAAACCCAAAGGGCCTTTGCCCCAGGTTCGACAGAAGCCAAAGAAAGAGAGCAAAAAGAAGAGATGA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37618 lncRNA downstream 76350 50445719 ~ 50448970 (-) True G30070
TU37619 lncRNA downstream 76350 50447009 ~ 50448970 (-) False G30070
TU37606 lncRNA downstream 138761 50386260 ~ 50386559 (-) True G30065
TU37601 lncRNA downstream 168972 50353895 ~ 50356348 (-) True G30061
TU37596 lncRNA downstream 190715 50328270 ~ 50334605 (-) True G30059
TU37636 lncRNA upstream 74079 50601457 ~ 50602050 (-) True G30086
TU37641 lncRNA upstream 86210 50613588 ~ 50613903 (-) True G30091
TU37644 lncRNA upstream 126841 50654219 ~ 50654513 (-) True G30094
TU37646 lncRNA upstream 132566 50659944 ~ 50660176 (-) True G30096
TU37660 lncRNA upstream 223043 50750421 ~ 50753174 (-) True G30108
AMCG00008295 mRNA downstream 6781 50451087 ~ 50518539 (-) True AMCG00008295
AMCG00008293 mRNA downstream 119104 50397739 ~ 50406216 (-) True AMCG00008293
AMCG00008289 mRNA downstream 211885 50308778 ~ 50313435 (-) True AMCG00008289
AMCG00008290 mRNA downstream 231957 50292332 ~ 50293363 (-) True AMCG00008290
AMCG00008287 mRNA downstream 369455 50147817 ~ 50155865 (-) True AMCG00008287
AMCG00008297 mRNA upstream 22687 50550065 ~ 50559321 (-) True AMCG00008297
AMCG00008300 mRNA upstream 264698 50792076 ~ 50798319 (-) True AMCG00008300
AMCG00008299 mRNA upstream 283001 50810379 ~ 50813806 (-) True AMCG00008299
AMCG00008302 mRNA upstream 312882 50840260 ~ 50916380 (-) True AMCG00008302
AMCG00008301 mRNA upstream 396674 50924052 ~ 50936800 (-) True AMCG00008301
TU37591 other downstream 251137 50273738 ~ 50274183 (-) True G30054
TU37508 other downstream 471218 50053825 ~ 50054102 (-) True G29974
TU37454 other downstream 624369 49795971 ~ 49900951 (-) True G29928
TU37036 other downstream 2242107 48281342 ~ 48283213 (-) False AMCG00008256
TU36999 other downstream 2400638 48123925 ~ 48124682 (-) True G29544

Expression Profile