RNA id: AMCG00008300


Basic Information

Item Value
RNA id AMCG00008300
length 489
RNA type mRNA
GC content 0.56
exon number 3
gene id AMCG00008300
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 50792076 ~ 50798319 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTTCATGGCTACAGGGGGAAGGAGCCACTGGGGCTGCAGATTTTCATCGGGACGGCTGACGAGAGGATCCTGAAACCGCATGCCTTCTACCAGGTCCACCGCATCACAGGCAAAACCGTCACCACCACCAGCTACGAGAAGGTCGTCGGCAGCACCAAGATCCTGGAAATCCCTCTGGAGCCCAAGAACAACATGAAAGCTCTGAGGAATGCGGATATCGAGCTGAGAAAAGGGGAGACGGACATTGGCAGGAAGAACACGAGAGTACGCCTGGTCTTCCGCATTCACATACCTCAACCCGGGGGAGGCGTGGTCTCGCTCCAGGCGGCGTCGAACCCCATTGAGTGCTCCCAGAGATCTGCTCATGAGCTCCCTATGGTTGAGAAGCAGGACACAGAAAGCTGCTCCATCCTTGGGGGGCAACAGATGATCCTGACAGGGCAGAACTTCACCTCTGACTCCAAAGTGGTGTTCACAGAGAAGACACAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37660 lncRNA downstream 38902 50750421 ~ 50753174 (-) True G30108
TU37646 lncRNA downstream 131900 50659944 ~ 50660176 (-) True G30096
TU37644 lncRNA downstream 137563 50654219 ~ 50654513 (-) True G30094
TU37641 lncRNA downstream 178173 50613588 ~ 50613903 (-) True G30091
TU37636 lncRNA downstream 190026 50601457 ~ 50602050 (-) True G30086
TU37698 lncRNA upstream 269821 51068140 ~ 51068561 (-) True G30143
TU37706 lncRNA upstream 384355 51182674 ~ 51182933 (-) True G30149
TU37732 lncRNA upstream 622328 51420647 ~ 51421417 (-) True G30170
TU37734 lncRNA upstream 627012 51425331 ~ 51425584 (-) True G30172
TU37786 lncRNA upstream 955764 51754083 ~ 51754304 (-) True G30218
AMCG00008297 mRNA downstream 232755 50550065 ~ 50559321 (-) True AMCG00008297
AMCG00008298 mRNA downstream 264698 50525320 ~ 50527378 (-) False AMCG00008298
AMCG00008295 mRNA downstream 273537 50451087 ~ 50518539 (-) True AMCG00008295
AMCG00008293 mRNA downstream 385860 50397739 ~ 50406216 (-) True AMCG00008293
AMCG00008289 mRNA downstream 478641 50308778 ~ 50313435 (-) True AMCG00008289
AMCG00008299 mRNA upstream 12060 50810379 ~ 50813806 (-) True AMCG00008299
AMCG00008302 mRNA upstream 41941 50840260 ~ 50916380 (-) True AMCG00008302
AMCG00008301 mRNA upstream 125733 50924052 ~ 50936800 (-) True AMCG00008301
AMCG00008303 mRNA upstream 228949 51027268 ~ 51036822 (-) True AMCG00008303
AMCG00008305 mRNA upstream 623155 51421474 ~ 51441540 (-) True AMCG00008305
TU37623 other downstream 264040 50523987 ~ 50528036 (-) True AMCG00008298
TU37591 other downstream 517893 50273738 ~ 50274183 (-) True G30054
TU37508 other downstream 737974 50053825 ~ 50054102 (-) True G29974
TU37454 other downstream 891125 49795971 ~ 49900951 (-) True G29928
TU37036 other downstream 2508863 48281342 ~ 48283213 (-) False AMCG00008256

Expression Profile