RNA id: AMCG00008303


Basic Information

Item Value
RNA id AMCG00008303
length 732
RNA type mRNA
GC content 0.52
exon number 4
gene id AMCG00008303
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 51027268 ~ 51036822 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TCCGGAGCAACACAAGTACTGGTTGAAGTCAGTCCAGACATCCATATTTGTGGACTGTGTAAGCAGCAGTATAACAACTTTGACATTTTTCTGGCCCACAAGCAAAATGGCTGCCATGTGCACACCTCTGACCCTACCGCCCCCAGCACTGTTCACACTATTACAGATTCCAGCTCCGAATTTGTCTTTGAGGAAACTTACCAGGCCTGCACTCTGAGGAAGATCCAAACGAAAGCCCCCAAAACGCCTtccaaaaaattaaaacctgcACTCACTTCCAAGAAACTCTCCTGCTGCTTCTCAGgttgCACCTTCAAAACCCAATATGGTCAAAAAGATATGGAAAGACACCTTAAAACTCACACAGGAGAGAAGCCCTTCGAGTGCGAGGTATGCAGTAAGCGCTTCAGCCGCAGAGACAAGCTGACCATGCATGGCCGCTCGCACACGGGGGAGAAGCCACACAAGTGCAAGTACTGCGAGTACGCGGCCGCCGACAGCAGCAGCCTGAAGAAGCACCTCCGCATCCACTACGACGAACGTCCCTTCAAGTGCCAGATCTGCCCCTACGCCAGTCGCAACTCCAGCCAGCTCACCGTGCACCTGCGCTCGCACACAGGTAATGTCTCCTGCCCACCGCCCTATAAGGAAAAGAGCTCAGCTCCCATTTTCACCAGGAAgtcaaataaaggaaaatgttgtGACCCGCAGCACAAAGTGGCAGTGGCACAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37660 lncRNA downstream 274094 50750421 ~ 50753174 (-) True G30108
TU37646 lncRNA downstream 367092 50659944 ~ 50660176 (-) True G30096
TU37644 lncRNA downstream 372755 50654219 ~ 50654513 (-) True G30094
TU37641 lncRNA downstream 413365 50613588 ~ 50613903 (-) True G30091
TU37636 lncRNA downstream 425218 50601457 ~ 50602050 (-) True G30086
TU37698 lncRNA upstream 31318 51068140 ~ 51068561 (-) True G30143
TU37706 lncRNA upstream 145852 51182674 ~ 51182933 (-) True G30149
TU37732 lncRNA upstream 383825 51420647 ~ 51421417 (-) True G30170
TU37734 lncRNA upstream 388509 51425331 ~ 51425584 (-) True G30172
TU37786 lncRNA upstream 717261 51754083 ~ 51754304 (-) True G30218
AMCG00008301 mRNA downstream 90468 50924052 ~ 50936800 (-) True AMCG00008301
AMCG00008302 mRNA downstream 110888 50840260 ~ 50916380 (-) True AMCG00008302
AMCG00008299 mRNA downstream 213462 50810379 ~ 50813806 (-) True AMCG00008299
AMCG00008300 mRNA downstream 228949 50792076 ~ 50798319 (-) True AMCG00008300
AMCG00008297 mRNA downstream 467947 50550065 ~ 50559321 (-) True AMCG00008297
AMCG00008305 mRNA upstream 384652 51421474 ~ 51441540 (-) True AMCG00008305
AMCG00008306 mRNA upstream 434397 51471219 ~ 51497212 (-) True AMCG00008306
AMCG00008307 mRNA upstream 473932 51510754 ~ 51515400 (-) True AMCG00008307
AMCG00008311 mRNA upstream 706587 51743409 ~ 51743798 (-) True AMCG00008311
AMCG00008312 mRNA upstream 1031660 52068482 ~ 52069809 (-) True AMCG00008312
TU37623 other downstream 499232 50523987 ~ 50528036 (-) True AMCG00008298
TU37591 other downstream 753085 50273738 ~ 50274183 (-) True G30054
TU37508 other downstream 973166 50053825 ~ 50054102 (-) True G29974
TU37454 other downstream 1126317 49795971 ~ 49900951 (-) True G29928
TU37036 other downstream 2744055 48281342 ~ 48283213 (-) False AMCG00008256

Expression Profile