RNA id: TU37855



Basic Information


Item Value
RNA id TU37855
length 213
lncRNA type sense_over
GC content 0.53
exon number 2
gene id AMCG00008318
representative False

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 52329236 ~ 52339097 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCCCACTAGGCTCCACTCCCATGTGACTATACCTCCCTTCCAACCACGCCACCCCATTTTTATTGATGTGAGAGCAGGGGCCTCACTAACAACTACTACCCCCCTACAGGTCTAAACCTGAAATATACCAACTTGGAACAGAGGACTAACCACAGGAAACATGACACGGAGCGCCTCGGCTCAAAGTTCTTGGTGGTGCGGAGAGGACTACCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37846 lncRNA downstream 11092 52326161 ~ 52326391 (-) True G30276
TU37845 lncRNA downstream 11446 52325705 ~ 52326037 (-) True G30275
TU37840 lncRNA downstream 48360 52288890 ~ 52289123 (-) True G30270
TU37836 lncRNA downstream 58364 52278857 ~ 52279119 (-) True G30266
TU37805 lncRNA downstream 180404 52156790 ~ 52157079 (-) True G30237
TU37881 lncRNA upstream 42690 52381056 ~ 52381966 (-) False AMCG00008325
TU37882 lncRNA upstream 45107 52383473 ~ 52384567 (-) False AMCG00008325
TU38019 lncRNA upstream 741218 53079584 ~ 53082902 (-) True G30409
TU38028 lncRNA upstream 806819 53145185 ~ 53148173 (-) True G30417
TU38106 lncRNA upstream 1073628 53411994 ~ 53416431 (-) True G30479
AMCG00008322 mRNA downstream 44069 52252677 ~ 52293414 (-) True AMCG00008322
AMCG00008314 mRNA downstream 87387 52189182 ~ 52250096 (-) True AMCG00008314
AMCG00008313 mRNA downstream 192756 52137169 ~ 52144727 (-) True AMCG00008313
AMCG00008312 mRNA downstream 267674 52068482 ~ 52069809 (-) True AMCG00008312
AMCG00008311 mRNA downstream 593685 51743409 ~ 51743798 (-) True AMCG00008311
AMCG00008321 mRNA upstream 6663 52345029 ~ 52345527 (-) True AMCG00008321
AMCG00008319 mRNA upstream 18135 52356501 ~ 52362043 (-) True AMCG00008319
AMCG00008317 mRNA upstream 27787 52366153 ~ 52370382 (-) True AMCG00008317
AMCG00008325 mRNA upstream 43323 52381689 ~ 52384302 (-) True AMCG00008325
AMCG00008323 mRNA upstream 47994 52386360 ~ 52388370 (-) True AMCG00008323
TU37623 other downstream 1809447 50523987 ~ 50528036 (-) True AMCG00008298
TU37591 other downstream 2063300 50273738 ~ 50274183 (-) True G30054
TU37508 other downstream 2283381 50053825 ~ 50054102 (-) True G29974
TU37454 other downstream 2436532 49795971 ~ 49900951 (-) True G29928
TU37036 other downstream 4054270 48281342 ~ 48283213 (-) False AMCG00008256

Expression Profile