RNA id: AMCG00008322



Basic Information


Item Value
RNA id AMCG00008322
length 240
RNA type mRNA
GC content 0.54
exon number 2
gene id AMCG00008322
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 52252677 ~ 52293414 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCCCCAAGCTGTCTTCCTTACATGTGAGGATTGCATTGAGAAGGAAGCAATGGACAGGAAGGAAGAGGAGCAATGGGACTTCATGGAGTTGGAGTGGGAGGAGGACACACTCGTCCCAGACAGTGGGCTGAAATACAACATGGAAGAGGCCCTGTTAGGGCCAGAGAACAGCCACACAAGGGCGTTCCTCCATATCCCCAAACTCCGCTCCTCGTGGTCCGGTCTGCACTTCCACTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37805 lncRNA downstream 95598 52156790 ~ 52157079 (-) True G30237
TU37801 lncRNA downstream 151357 52101040 ~ 52101320 (-) True G30233
TU37799 lncRNA downstream 159022 52091632 ~ 52093655 (-) True G30231
TU37796 lncRNA downstream 185221 52067208 ~ 52067456 (-) True G30228
TU37793 lncRNA downstream 323298 51929106 ~ 51929379 (-) True G30225
TU37845 lncRNA upstream 32291 52325705 ~ 52326037 (-) True G30275
TU37846 lncRNA upstream 32747 52326161 ~ 52326391 (-) True G30276
TU37855 lncRNA upstream 44069 52337483 ~ 52338366 (-) False AMCG00008318
TU37881 lncRNA upstream 87642 52381056 ~ 52381966 (-) False AMCG00008325
TU37882 lncRNA upstream 90059 52383473 ~ 52384567 (-) False AMCG00008325
AMCG00008314 mRNA downstream 2581 52189182 ~ 52250096 (-) True AMCG00008314
AMCG00008313 mRNA downstream 107950 52137169 ~ 52144727 (-) True AMCG00008313
AMCG00008312 mRNA downstream 182868 52068482 ~ 52069809 (-) True AMCG00008312
AMCG00008311 mRNA downstream 508879 51743409 ~ 51743798 (-) True AMCG00008311
AMCG00008307 mRNA downstream 737277 51510754 ~ 51515400 (-) True AMCG00008307
AMCG00008318 mRNA upstream 35822 52329236 ~ 52339097 (-) True AMCG00008318
AMCG00008321 mRNA upstream 51615 52345029 ~ 52345527 (-) True AMCG00008321
AMCG00008319 mRNA upstream 63087 52356501 ~ 52362043 (-) True AMCG00008319
AMCG00008317 mRNA upstream 72739 52366153 ~ 52370382 (-) True AMCG00008317
AMCG00008325 mRNA upstream 88275 52381689 ~ 52384302 (-) True AMCG00008325
TU37623 other downstream 1724641 50523987 ~ 50528036 (-) True AMCG00008298
TU37591 other downstream 1978494 50273738 ~ 50274183 (-) True G30054
TU37508 other downstream 2198575 50053825 ~ 50054102 (-) True G29974
TU37454 other downstream 2351726 49795971 ~ 49900951 (-) True G29928
TU37036 other downstream 3969464 48281342 ~ 48283213 (-) False AMCG00008256

Expression Profile