RNA id: AMCG00008325


Basic Information

Item Value
RNA id AMCG00008325
length 1251
RNA type mRNA
GC content 0.57
exon number 6
gene id AMCG00008325
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 52381056 ~ 52384567 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTGTACAAGTGTGTGGTGAAGTCTTGCTCCCTGACCTTCCAGAAGCTGGACCACTTCCTGGAGCACATCCACACCCACCAGGAGCAGCTGACGTACCGCTGCCACCTCTGTAACAAAGTGTACCCCTCACTGTTCGAGCTGGGGGTCCACCAGTACTCCCACAGCTTCAGTCCCCAGCAGAGCCCCCGCAAGGAACCCAATTTCTACCGATGCCTGAAGTGCCAGAGCAGGTATTCGACACAAGAAGCCTTGGAGCAGCACCTACAAACTGCATCGCACAACTTCCCCTGCCCGCACTGCCAGAAGGTGTTCCCCTGCGAAAGGTACTTCCGGCGACACCTCCCCACTCACGGCATGGGAGGCAAGTTCAAATGTCAGACCTGCAAGAAGTTCTTCAAGACCGAGCATTACCTCAAGCTGCACACGCGCATCCATTCTGGTGAGATCCCGAACCCGAGGGGTGCTGAGGCAGAATGGAAGACCGAATGGAAGGCATATGATGAAAGATTTGGGGGCGAGAAGCCCTACAAATGCACGGTTTGCGACGCCTCCTTCAACCGCAAAGACAAAGTGAAGAGGCACATGTTAATCCATGAACCctttaagaaatacaaatgtccCTTCAGGGCACATGCGGGATGTACAAAAGAGTTTAACCGACCAGACAAGCTGAAGGCTCACATACTATCCCACTCTGGCATCAAGCCCTACAAGTGCCAGTACTGCCAGAAGGCCTTCAGCCGCCGCGCTCACATGCTGGAGCACCAGCGGTCGCACACGGGCAACTACCGCTTCCGCTGCCCCACCTGCAACAAGGGCTTCACCCGGCAGAAATACTACAAGGACCACAAGTGCCCGCAGGCGGGGGGTGGCGAGAGGGAAGGCCCAGACAGAGGGACCAAGAGGAGGCAGTCTCGCTCCAGGAAGGCTGGGGGAGGCGGCAGGGGGGCAGGACTTCCTGACATGGAGATAGGACATGATGGAAAGGTGACAAGCCCCCAgccggaggaggaggaagaggaagaggaggaggaagaggaagatgaGGGGCTGCAGGAACCTCAAGCTGTGCTGTCTATCACAGTGGGAGAGAAAAGAGGTAGAGGAGACATGGAggatgaagaagaagaggaggacaATGAGGGAGGGACTTCTGAAGGCATGGCGAGCACCACAGACCTGACGCAGCTCCAGACCAGCACTGACGTCACCCTGCTTACCGTGCCCGTCTTCATCGAGACTGCGGACTGA

Function

GO: NA

KEGG:

id description
K24852 ZNF341; zinc finger protein 341

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37855 lncRNA downstream 43323 52337483 ~ 52338366 (-) False AMCG00008318
TU37846 lncRNA downstream 55298 52326161 ~ 52326391 (-) True G30276
TU37845 lncRNA downstream 55652 52325705 ~ 52326037 (-) True G30275
TU37840 lncRNA downstream 92566 52288890 ~ 52289123 (-) True G30270
TU37836 lncRNA downstream 102570 52278857 ~ 52279119 (-) True G30266
TU38019 lncRNA upstream 695282 53079584 ~ 53082902 (-) True G30409
TU38028 lncRNA upstream 760883 53145185 ~ 53148173 (-) True G30417
TU38106 lncRNA upstream 1027692 53411994 ~ 53416431 (-) True G30479
TU38120 lncRNA upstream 1046650 53430952 ~ 53434101 (-) True G30486
TU38148 lncRNA upstream 1102539 53486841 ~ 53491107 (-) True G30505
AMCG00008317 mRNA downstream 11307 52366153 ~ 52370382 (-) True AMCG00008317
AMCG00008319 mRNA downstream 19646 52356501 ~ 52362043 (-) True AMCG00008319
AMCG00008321 mRNA downstream 36162 52345029 ~ 52345527 (-) True AMCG00008321
AMCG00008318 mRNA downstream 42592 52329236 ~ 52339097 (-) True AMCG00008318
AMCG00008322 mRNA downstream 88275 52252677 ~ 52293414 (-) True AMCG00008322
AMCG00008323 mRNA upstream 2058 52386360 ~ 52388370 (-) True AMCG00008323
AMCG00008324 mRNA upstream 4493 52388795 ~ 52425671 (-) True AMCG00008324
AMCG00008329 mRNA upstream 109039 52493341 ~ 52505322 (-) True AMCG00008329
AMCG00008331 mRNA upstream 187818 52572120 ~ 52584025 (-) True AMCG00008331
AMCG00008332 mRNA upstream 242213 52626515 ~ 52649562 (-) True AMCG00008332
TU37623 other downstream 1853653 50523987 ~ 50528036 (-) True AMCG00008298
TU37591 other downstream 2107506 50273738 ~ 50274183 (-) True G30054
TU37508 other downstream 2327587 50053825 ~ 50054102 (-) True G29974
TU37454 other downstream 2480738 49795971 ~ 49900951 (-) True G29928
TU37036 other downstream 4098476 48281342 ~ 48283213 (-) False AMCG00008256

Expression Profile