Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU28504 |
| length | 546 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G22720 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 11229825 ~ 11230393 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0002011 | morphogenesis of an epithelial sheet | biological_process |
| GO:0055113 | epiboly involved in gastrulation with mouth forming second | biological_process |
| GO:0090504 | epiboly | biological_process |
| GO:0001702 | gastrulation with mouth forming second | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU28495 | lncRNA | upstream | 118102 | 11111343 ~ 11111723 (+) | True | G22712 |
| TU28422 | lncRNA | upstream | 544757 | 10626674 ~ 10685068 (+) | True | G22652 |
| TU28342 | lncRNA | upstream | 907967 | 10320469 ~ 10321858 (+) | True | G22596 |
| TU28244 | lncRNA | upstream | 988417 | 10239589 ~ 10241408 (+) | True | G22528 |
| TU28245 | lncRNA | upstream | 988417 | 10239589 ~ 10241408 (+) | False | G22528 |
| TU28516 | lncRNA | downstream | 281760 | 11512153 ~ 11522358 (+) | True | G22730 |
| TU28528 | lncRNA | downstream | 310590 | 11540983 ~ 11541524 (+) | True | G22738 |
| TU28532 | lncRNA | downstream | 340559 | 11570952 ~ 11573862 (+) | True | G22741 |
| TU28547 | lncRNA | downstream | 493099 | 11723492 ~ 11723746 (+) | True | G22756 |
| TU28551 | lncRNA | downstream | 582472 | 11812865 ~ 11813093 (+) | True | G22760 |
| AMCG00007310 | mRNA | upstream | 452118 | 10758834 ~ 10777707 (+) | True | AMCG00007310 |
| AMCG00007306 | mRNA | upstream | 486150 | 10739045 ~ 10743675 (+) | True | AMCG00007306 |
| AMCG00007305 | mRNA | upstream | 562530 | 10660181 ~ 10667295 (+) | True | AMCG00007305 |
| AMCG00007308 | mRNA | upstream | 574836 | 10628350 ~ 10654989 (+) | True | AMCG00007308 |
| AMCG00007307 | mRNA | upstream | 617915 | 10611533 ~ 10611910 (+) | False | AMCG00007307 |
| AMCG00007311 | mRNA | downstream | 358241 | 11588634 ~ 11603718 (+) | True | AMCG00007311 |
| AMCG00007317 | mRNA | downstream | 2311363 | 13541756 ~ 13551121 (+) | True | AMCG00007317 |
| AMCG00007321 | mRNA | downstream | 2392751 | 13623144 ~ 13624807 (+) | True | AMCG00007321 |
| AMCG00007322 | mRNA | downstream | 2416234 | 13646627 ~ 13647013 (+) | True | AMCG00007322 |
| AMCG00007328 | mRNA | downstream | 2744912 | 13975305 ~ 13981853 (+) | True | AMCG00007328 |
| TU28420 | other | upstream | 616721 | 10611196 ~ 10613104 (+) | True | AMCG00007307 |
| TU28037 | other | upstream | 1730097 | 9436524 ~ 9499728 (+) | True | G22372 |
| TU27900 | other | upstream | 2518514 | 8704657 ~ 8711311 (+) | True | AMCG00007253 |
| TU27825 | other | upstream | 2833583 | 8367436 ~ 8396242 (+) | True | AMCG00007243 |
| TU27445 | other | upstream | 3850879 | 7374323 ~ 7378946 (+) | True | G21891 |
| TU28829 | other | downstream | 3248280 | 14478673 ~ 14489692 (+) | True | AMCG00007337 |
| TU28988 | other | downstream | 4056104 | 15286497 ~ 15287960 (+) | False | AMCG00007352 |
| TU29675 | other | downstream | 6968375 | 18198768 ~ 18201960 (+) | True | AMCG00007417 |
| TU29676 | other | downstream | 6976685 | 18207078 ~ 18208308 (+) | True | G23698 |
| TU29705 | other | downstream | 7059715 | 18290108 ~ 18292338 (+) | True | G23724 |
