RNA id: TU28520



Basic Information


Item Value
RNA id TU28520
length 265
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G22732
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 11363597 ~ 11412595 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


AGGGAAATGGAtatttgacccctttgacttagtacttggtggcaaaacccttgttggcaatcacagaggtcagacgtttcttgtagttggccaccaggtttgcacacatctcaggagggattttgtcccactcctctttgcagatcctctccaagtcattaaggtttcgaggctgacgtttggcaactcgaaccttcagctccctccacagattttctatgggattaaggtctggagactggctaggccactccaggaccttaat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU28510 lncRNA downstream 81188 11264642 ~ 11282409 (-) True G22725
TU28496 lncRNA downstream 251874 11111345 ~ 11111723 (-) True G22713
TU28469 lncRNA downstream 708067 10654174 ~ 10655530 (-) True G22687
TU28447 lncRNA downstream 731663 10628348 ~ 10631934 (-) True G22671
TU28459 lncRNA downstream 750609 10611189 ~ 10612988 (-) True G22680
TU28529 lncRNA upstream 128387 11540982 ~ 11541638 (-) True G22739
TU28535 lncRNA upstream 183520 11596115 ~ 11596436 (-) True G22744
TU28548 lncRNA upstream 310897 11723492 ~ 11723746 (-) True G22757
TU28559 lncRNA upstream 451320 11863915 ~ 11864160 (-) True G22768
TU28569 lncRNA upstream 478074 11890669 ~ 11890987 (-) True G22778
AMCG00007309 mRNA downstream 609761 10752238 ~ 10753836 (-) True AMCG00007309
AMCG00007302 mRNA downstream 990650 10361701 ~ 10372947 (-) True AMCG00007302
AMCG00007295 mRNA downstream 1036776 10320340 ~ 10326821 (-) True AMCG00007295
AMCG00007297 mRNA downstream 1043966 10313591 ~ 10319631 (-) True AMCG00007297
AMCG00007298 mRNA downstream 1090989 10265045 ~ 10272608 (-) False AMCG00007298
AMCG00007312 mRNA upstream 731321 12143916 ~ 12262705 (-) True AMCG00007312
AMCG00007314 mRNA upstream 850238 12262833 ~ 12263877 (-) True AMCG00007314
AMCG00007313 mRNA upstream 851299 12263894 ~ 12307056 (-) True AMCG00007313
AMCG00007315 mRNA upstream 905236 12317831 ~ 12319714 (-) True AMCG00007315
AMCG00007316 mRNA upstream 1650199 13062794 ~ 13264962 (-) True AMCG00007316
TU28289 other downstream 1173393 10187314 ~ 10190204 (-) False AMCG00007289
TU27830 other downstream 2967373 8393196 ~ 8396224 (-) True G22200
TU27501 other downstream 3856722 7499447 ~ 7506875 (-) True G21942
TU27173 other downstream 5349428 6007640 ~ 6014169 (-) False AMCG00007173
TU27087 other downstream 5543313 5816809 ~ 5820284 (-) True G21632
TU28633 other upstream 1938922 13351517 ~ 13352073 (-) True G22838
TU28749 other upstream 2533048 13945643 ~ 13946065 (-) True G22931
TU29239 other upstream 4908402 16320997 ~ 16322651 (-) False AMCG00007365
TU29238 other upstream 4908442 16321037 ~ 16322651 (-) False AMCG00007365
TU29265 other upstream 5117579 16530174 ~ 16621905 (-) False AMCG00007375

Expression Profile