RNA id: TU28614



Basic Information


Item Value
RNA id TU28614
length 260
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G22819
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 12993677 ~ 12993936 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gtttgaaatctttgcaaatttattaaaaataaaaaacaaaaaaagcacatgtacataagtattcacagcctttgctcaatactttgttgaagcacctttggcaccaattacagcctcaagtctttttgagtatgatgctacaagcttggcacacctatttttgggcagtttctcccattcttctttgcaggacctctcaagctccatcaggttggatggggagcgtcggtgcacagccattttcagatctctccagagat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU28586 lncRNA downstream 900201 12081746 ~ 12093476 (-) True G22794
TU28576 lncRNA downstream 1086183 11907274 ~ 11907494 (-) True G22785
TU28570 lncRNA downstream 1102036 11891388 ~ 11891641 (-) True G22779
TU28569 lncRNA downstream 1102690 11890669 ~ 11890987 (-) True G22778
TU28559 lncRNA downstream 1129517 11863915 ~ 11864160 (-) True G22768
TU28712 lncRNA upstream 636309 13630245 ~ 13631291 (-) True G22901
TU28713 lncRNA upstream 652595 13646531 ~ 13649777 (-) True G22902
TU28752 lncRNA upstream 1038413 14032349 ~ 14033212 (-) False AMCG00007326
TU28762 lncRNA upstream 1066834 14060770 ~ 14061129 (-) True G22941
TU28763 lncRNA upstream 1067798 14061734 ~ 14062135 (-) True G22942
AMCG00007315 mRNA downstream 673963 12317831 ~ 12319714 (-) True AMCG00007315
AMCG00007313 mRNA downstream 686621 12263894 ~ 12307056 (-) True AMCG00007313
AMCG00007314 mRNA downstream 729800 12262833 ~ 12263877 (-) True AMCG00007314
AMCG00007312 mRNA downstream 730972 12143916 ~ 12262705 (-) True AMCG00007312
AMCG00007309 mRNA downstream 2239841 10752238 ~ 10753836 (-) True AMCG00007309
AMCG00007316 mRNA upstream 68858 13062794 ~ 13264962 (-) True AMCG00007316
AMCG00007320 mRNA upstream 398964 13392900 ~ 13394426 (-) True AMCG00007320
AMCG00007319 mRNA upstream 582739 13576675 ~ 13614445 (-) True AMCG00007319
AMCG00007318 mRNA upstream 684045 13677981 ~ 13687064 (-) True AMCG00007318
AMCG00007323 mRNA upstream 750034 13743970 ~ 13856397 (-) True AMCG00007323
TU28289 other downstream 2803473 10187314 ~ 10190204 (-) False AMCG00007289
TU27830 other downstream 4597453 8393196 ~ 8396224 (-) True G22200
TU27501 other downstream 5486802 7499447 ~ 7506875 (-) True G21942
TU27173 other downstream 6979508 6007640 ~ 6014169 (-) False AMCG00007173
TU27087 other downstream 7173393 5816809 ~ 5820284 (-) True G21632
TU28633 other upstream 357581 13351517 ~ 13352073 (-) True G22838
TU28749 other upstream 951707 13945643 ~ 13946065 (-) True G22931
TU29239 other upstream 3327061 16320997 ~ 16322651 (-) False AMCG00007365
TU29238 other upstream 3327101 16321037 ~ 16322651 (-) False AMCG00007365
TU29265 other upstream 3536238 16530174 ~ 16621905 (-) False AMCG00007375

Expression Profile