RNA id: TU29362



Basic Information


Item Value
RNA id TU29362
length 294
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G23429
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 16948452 ~ 16948745 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


AGGGGCTCGGCAACACATCTGAAGAGGAGGTAGTTTCAAAAGCAGAGTGCCTTATCCTTTGTCTGTGAGCTTTCTGTTAACCCGCAGGGATTCATATCATTAGGCCCATTCAAAAAGCATATCTATTTTCTGGCTGTATTGGAAAAAGCATGGTAGACACGGTAGCAGACTCAATAGTATTTCGAAATGGCCTTTGTTTGCTTTCCCACTACATTCGTCTCCTTGCACAGTTGTATGACTTGCAGAACACAGGCGAGATTAGAGGCGCTTTAAAAAACTACCCTCAAATTTGTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU29321 lncRNA downstream 239272 16706289 ~ 16709180 (-) True G23397
TU29290 lncRNA downstream 285787 16660881 ~ 16662665 (-) True G23379
TU29252 lncRNA downstream 568161 16378518 ~ 16380291 (-) True G23344
TU29199 lncRNA downstream 649196 16237461 ~ 16299256 (-) False AMCG00007366
TU29198 lncRNA downstream 649196 16291541 ~ 16299256 (-) True AMCG00007366
TU29364 lncRNA upstream 15222 16963967 ~ 16964267 (-) True G23431
TU29373 lncRNA upstream 44170 16992915 ~ 16993435 (-) True G23439
TU29374 lncRNA upstream 61044 17009789 ~ 17010047 (-) True G23440
TU29375 lncRNA upstream 66593 17015338 ~ 17015671 (-) True G23441
TU29376 lncRNA upstream 67277 17016022 ~ 17016266 (-) True G23442
AMCG00007380 mRNA downstream 215607 16712092 ~ 16732845 (-) True AMCG00007380
AMCG00007376 mRNA downstream 277817 16665551 ~ 16670635 (-) True AMCG00007376
AMCG00007375 mRNA downstream 418228 16469467 ~ 16530224 (-) True AMCG00007375
AMCG00007373 mRNA downstream 480765 16455533 ~ 16467687 (-) True AMCG00007373
AMCG00007374 mRNA downstream 504339 16385385 ~ 16444113 (-) True AMCG00007374
AMCG00007384 mRNA upstream 22557 16971302 ~ 16978773 (-) True AMCG00007384
AMCG00007387 mRNA upstream 100971 17049716 ~ 17058918 (-) True AMCG00007387
AMCG00007386 mRNA upstream 201427 17150172 ~ 17168177 (-) True AMCG00007386
AMCG00007388 mRNA upstream 238093 17186838 ~ 17190438 (-) True AMCG00007388
AMCG00007389 mRNA upstream 252115 17200860 ~ 17237726 (-) True AMCG00007389
TU29265 other downstream 326547 16530174 ~ 16621905 (-) False AMCG00007375
TU29239 other downstream 625801 16320997 ~ 16322651 (-) False AMCG00007365
TU29238 other downstream 625801 16321037 ~ 16322651 (-) False AMCG00007365
TU28749 other downstream 3002387 13945643 ~ 13946065 (-) True G22931
TU28633 other downstream 3596379 13351517 ~ 13352073 (-) True G22838
TU29633 other upstream 1106725 18055470 ~ 18058949 (-) True G23661
TU29846 other upstream 1827615 18776360 ~ 18777638 (-) True G23838
TU30203 other upstream 2966401 19915146 ~ 19923153 (-) True AMCG00007487
TU30340 other upstream 3382768 20331513 ~ 20331811 (-) True G24217
TU30382 other upstream 3522366 20471111 ~ 20472704 (-) True AMCG00007500

Expression Profile