RNA id: TU29374



Basic Information


Item Value
RNA id TU29374
length 259
lncRNA type inter_gene
GC content 0.53
exon number 1
gene id G23440
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 17009789 ~ 17010047 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GCTGGAGTCCTGCTGCTGGTGAGAGTGCTTGGCAATGCTGGGTCCTATTTACCGTAAAATGTCAGTGTTTGGCAGCACTCTTTCATGCTCAGAAAGCTGGCTTCCCGCTTCCTGGTGGACGGTTTTCATGTTGTCGCCGACGCACACCTTGTACTGCAGGGGCACTAGCGCTGTTGTGGGTGGCGTCTGTAAGCAGAAGTGCCTCCTGCTGTCAATGGAAATATTCACCGGAACATCCTGAGCAATCAGCAGAGCTACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU29373 lncRNA downstream 16354 16992915 ~ 16993435 (-) True G23439
TU29364 lncRNA downstream 45522 16963967 ~ 16964267 (-) True G23431
TU29362 lncRNA downstream 61044 16948452 ~ 16948745 (-) True G23429
TU29321 lncRNA downstream 300609 16706289 ~ 16709180 (-) True G23397
TU29290 lncRNA downstream 347124 16660881 ~ 16662665 (-) True G23379
TU29375 lncRNA upstream 5291 17015338 ~ 17015671 (-) True G23441
TU29376 lncRNA upstream 5975 17016022 ~ 17016266 (-) True G23442
TU29381 lncRNA upstream 21338 17031385 ~ 17031682 (-) True G23447
TU29382 lncRNA upstream 22881 17032928 ~ 17038985 (-) True G23448
TU29430 lncRNA upstream 301922 17311969 ~ 17314094 (-) True G23487
AMCG00007384 mRNA downstream 31016 16971302 ~ 16978773 (-) True AMCG00007384
AMCG00007380 mRNA downstream 276944 16712092 ~ 16732845 (-) True AMCG00007380
AMCG00007376 mRNA downstream 339154 16665551 ~ 16670635 (-) True AMCG00007376
AMCG00007375 mRNA downstream 479565 16469467 ~ 16530224 (-) True AMCG00007375
AMCG00007373 mRNA downstream 542102 16455533 ~ 16467687 (-) True AMCG00007373
AMCG00007387 mRNA upstream 39669 17049716 ~ 17058918 (-) True AMCG00007387
AMCG00007386 mRNA upstream 140125 17150172 ~ 17168177 (-) True AMCG00007386
AMCG00007388 mRNA upstream 176791 17186838 ~ 17190438 (-) True AMCG00007388
AMCG00007389 mRNA upstream 190813 17200860 ~ 17237726 (-) True AMCG00007389
AMCG00007393 mRNA upstream 317293 17327340 ~ 17348888 (-) True AMCG00007393
TU29265 other downstream 387884 16530174 ~ 16621905 (-) False AMCG00007375
TU29239 other downstream 687138 16320997 ~ 16322651 (-) False AMCG00007365
TU29238 other downstream 687138 16321037 ~ 16322651 (-) False AMCG00007365
TU28749 other downstream 3063724 13945643 ~ 13946065 (-) True G22931
TU28633 other downstream 3657716 13351517 ~ 13352073 (-) True G22838
TU29633 other upstream 1045423 18055470 ~ 18058949 (-) True G23661
TU29846 other upstream 1766313 18776360 ~ 18777638 (-) True G23838
TU30203 other upstream 2905099 19915146 ~ 19923153 (-) True AMCG00007487
TU30340 other upstream 3321466 20331513 ~ 20331811 (-) True G24217
TU30382 other upstream 3461064 20471111 ~ 20472704 (-) True AMCG00007500

Expression Profile