RNA id: TU29805



Basic Information


Item Value
RNA id TU29805
length 210
lncRNA type inter_gene
GC content 0.54
exon number 2
gene id G23799
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 18619285 ~ 18620731 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTCTAGTCTGGACACCTCACCAGCATTGTCCCAGTGTTAAACACGTCACAGATTTAATCAGTCAATCACCATCCTCAGCGTCCTCCCTGCCTGGCGACAGGGGCGGTGGTAGCGGGGGGAAGGCCTCATCCTCTGTGTTCTCATAATCGGGAATGTCAAACAGACTGTTCTCCAGCGGGTCAATCATGGCACCGAGCACTCAGATCCTTA

Function


GO:

id name namespace
GO:0007049 cell cycle biological_process

KEGG:

id description
ko04110 Cell cycle

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU29732 lncRNA downstream 216008 18314151 ~ 18403277 (-) True G23745
TU29680 lncRNA downstream 415379 18202459 ~ 18203906 (-) False AMCG00007418
TU29651 lncRNA downstream 545280 18072055 ~ 18074005 (-) True G23676
TU29637 lncRNA downstream 556293 17972906 ~ 18062992 (-) True G23663
TU29596 lncRNA downstream 712877 17906101 ~ 17906408 (-) True G23629
TU29820 lncRNA upstream 91346 18712077 ~ 18714368 (-) True G23813
TU29847 lncRNA upstream 157114 18777845 ~ 18778069 (-) True G23839
TU29848 lncRNA upstream 158440 18779171 ~ 18779608 (-) True G23840
TU29850 lncRNA upstream 160106 18780837 ~ 18781092 (-) True G23842
TU29851 lncRNA upstream 160483 18781214 ~ 18785137 (-) True G23843
AMCG00007441 mRNA downstream 5339 18597275 ~ 18613946 (-) True AMCG00007441
AMCG00007443 mRNA downstream 29158 18584799 ~ 18590127 (-) True AMCG00007443
AMCG00007435 mRNA downstream 46165 18570568 ~ 18573120 (-) True AMCG00007435
AMCG00007434 mRNA downstream 115894 18496190 ~ 18503391 (-) True AMCG00007434
AMCG00007432 mRNA downstream 136755 18475150 ~ 18482530 (-) True AMCG00007432
AMCG00007442 mRNA upstream 3992 18624723 ~ 18633969 (-) True AMCG00007442
AMCG00007445 mRNA upstream 93884 18714615 ~ 18733019 (-) True AMCG00007445
AMCG00007449 mRNA upstream 170847 18791578 ~ 18810571 (-) True AMCG00007449
AMCG00007448 mRNA upstream 195120 18815851 ~ 18823606 (-) True AMCG00007448
AMCG00007457 mRNA upstream 399989 19020720 ~ 19023092 (-) True AMCG00007457
TU29633 other downstream 560336 18055470 ~ 18058949 (-) True G23661
TU29265 other downstream 1997380 16530174 ~ 16621905 (-) False AMCG00007375
TU29239 other downstream 2296634 16320997 ~ 16322651 (-) False AMCG00007365
TU29238 other downstream 2296634 16321037 ~ 16322651 (-) False AMCG00007365
TU28749 other downstream 4673220 13945643 ~ 13946065 (-) True G22931
TU29846 other upstream 155629 18776360 ~ 18777638 (-) True G23838
TU30203 other upstream 1294415 19915146 ~ 19923153 (-) True AMCG00007487
TU30340 other upstream 1710782 20331513 ~ 20331811 (-) True G24217
TU30382 other upstream 1850380 20471111 ~ 20472704 (-) True AMCG00007500
TU31390 other upstream 5350940 23971671 ~ 23972665 (-) True G25026

Expression Profile