RNA id: TU29850



Basic Information


Item Value
RNA id TU29850
length 256
lncRNA type inter_gene
GC content 0.63
exon number 1
gene id G23842
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 18780837 ~ 18781092 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTGGGAGCCACGGTTGCAGTGCTCGGAGGTGAGGATGAGGCCCGGCAGACTGCTGGGCAGGTCAAGTCTGCGGAAGTACCACACCAGGTTCCAGAAGACGATAGGGTGGTGGTCCACGATGTCAGACACGGTTATGACCTGGTCGCCCTCGTTCTCCAGCAGGCTCTCCAGCTCCTTCCACAGCACCAGTGGACTAAGGTAGGGCACCGTCACCGGCTCAGGGTTGTGCAGCCGCCAGTCCAGGCTCAGGGGGTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU29848 lncRNA downstream 1229 18779171 ~ 18779608 (-) True G23840
TU29847 lncRNA downstream 2768 18777845 ~ 18778069 (-) True G23839
TU29820 lncRNA downstream 66469 18712077 ~ 18714368 (-) True G23813
TU29805 lncRNA downstream 160106 18619285 ~ 18620731 (-) True G23799
TU29732 lncRNA downstream 377560 18314151 ~ 18403277 (-) True G23745
TU29851 lncRNA upstream 122 18781214 ~ 18785137 (-) True G23843
TU29867 lncRNA upstream 48773 18829865 ~ 18830087 (-) True G23854
TU29883 lncRNA upstream 85675 18866767 ~ 18867479 (-) True G23867
TU29891 lncRNA upstream 120273 18901365 ~ 18901597 (-) True G23875
TU30035 lncRNA upstream 698922 19480014 ~ 19481087 (-) True G23982
AMCG00007445 mRNA downstream 47818 18714615 ~ 18733019 (-) True AMCG00007445
AMCG00007442 mRNA downstream 146868 18624723 ~ 18633969 (-) True AMCG00007442
AMCG00007441 mRNA downstream 166891 18597275 ~ 18613946 (-) True AMCG00007441
AMCG00007443 mRNA downstream 190710 18584799 ~ 18590127 (-) True AMCG00007443
AMCG00007435 mRNA downstream 207717 18570568 ~ 18573120 (-) True AMCG00007435
AMCG00007449 mRNA upstream 10486 18791578 ~ 18810571 (-) True AMCG00007449
AMCG00007448 mRNA upstream 34759 18815851 ~ 18823606 (-) True AMCG00007448
AMCG00007457 mRNA upstream 239628 19020720 ~ 19023092 (-) True AMCG00007457
AMCG00007455 mRNA upstream 242806 19023898 ~ 19025640 (-) True AMCG00007455
AMCG00007454 mRNA upstream 268980 19050072 ~ 19056271 (-) True AMCG00007454
TU29846 other downstream 3199 18776360 ~ 18777638 (-) True G23838
TU29633 other downstream 721888 18055470 ~ 18058949 (-) True G23661
TU29265 other downstream 2158932 16530174 ~ 16621905 (-) False AMCG00007375
TU29239 other downstream 2458186 16320997 ~ 16322651 (-) False AMCG00007365
TU30203 other upstream 1134054 19915146 ~ 19923153 (-) True AMCG00007487
TU30340 other upstream 1550421 20331513 ~ 20331811 (-) True G24217
TU30382 other upstream 1690019 20471111 ~ 20472704 (-) True AMCG00007500
TU31390 other upstream 5190579 23971671 ~ 23972665 (-) True G25026
TU31562 other upstream 5484732 24265824 ~ 24267921 (-) False AMCG00007637

Expression Profile