RNA id: TU29851



Basic Information


Item Value
RNA id TU29851
length 298
lncRNA type inter_gene
GC content 0.59
exon number 2
gene id G23843
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 18781214 ~ 18785137 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTCTGCCTCTTGACGCCCAGCCTCTGCCCCAGCAGCTCCAGGACCTGGCTCATGGGCCGGTACACATCATTCATCTGGATGCTCTTGACCAcgctctgcagcagctcctccccaaagggctcctcctcctctggcaGCACGCTCATCACCGGGTAGTTCAGacctgcaggagagagaagagCGGCTGTGCGTGTTCCACAGGATGTAGAAGGGCTGTATGGGGTCCTGGTGCAGCTTGAGGTTGTCCCAGAGGATCTGGATCAGCACATGCTTACTGTCCTCAGACATCCAGTGCCGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU29850 lncRNA downstream 122 18780837 ~ 18781092 (-) True G23842
TU29848 lncRNA downstream 1606 18779171 ~ 18779608 (-) True G23840
TU29847 lncRNA downstream 3145 18777845 ~ 18778069 (-) True G23839
TU29820 lncRNA downstream 66846 18712077 ~ 18714368 (-) True G23813
TU29805 lncRNA downstream 160483 18619285 ~ 18620731 (-) True G23799
TU29867 lncRNA upstream 44728 18829865 ~ 18830087 (-) True G23854
TU29883 lncRNA upstream 81630 18866767 ~ 18867479 (-) True G23867
TU29891 lncRNA upstream 116228 18901365 ~ 18901597 (-) True G23875
TU30035 lncRNA upstream 694877 19480014 ~ 19481087 (-) True G23982
TU30064 lncRNA upstream 794644 19579781 ~ 19579984 (-) True G24003
AMCG00007445 mRNA downstream 48195 18714615 ~ 18733019 (-) True AMCG00007445
AMCG00007442 mRNA downstream 147245 18624723 ~ 18633969 (-) True AMCG00007442
AMCG00007441 mRNA downstream 167268 18597275 ~ 18613946 (-) True AMCG00007441
AMCG00007443 mRNA downstream 191087 18584799 ~ 18590127 (-) True AMCG00007443
AMCG00007435 mRNA downstream 208094 18570568 ~ 18573120 (-) True AMCG00007435
AMCG00007449 mRNA upstream 6441 18791578 ~ 18810571 (-) True AMCG00007449
AMCG00007448 mRNA upstream 30714 18815851 ~ 18823606 (-) True AMCG00007448
AMCG00007457 mRNA upstream 235583 19020720 ~ 19023092 (-) True AMCG00007457
AMCG00007455 mRNA upstream 238761 19023898 ~ 19025640 (-) True AMCG00007455
AMCG00007454 mRNA upstream 264935 19050072 ~ 19056271 (-) True AMCG00007454
TU29846 other downstream 3576 18776360 ~ 18777638 (-) True G23838
TU29633 other downstream 722265 18055470 ~ 18058949 (-) True G23661
TU29265 other downstream 2159309 16530174 ~ 16621905 (-) False AMCG00007375
TU29239 other downstream 2458563 16320997 ~ 16322651 (-) False AMCG00007365
TU30203 other upstream 1130009 19915146 ~ 19923153 (-) True AMCG00007487
TU30340 other upstream 1546376 20331513 ~ 20331811 (-) True G24217
TU30382 other upstream 1685974 20471111 ~ 20472704 (-) True AMCG00007500
TU31390 other upstream 5186534 23971671 ~ 23972665 (-) True G25026
TU31562 other upstream 5480687 24265824 ~ 24267921 (-) False AMCG00007637

Expression Profile