RNA id: TU29867



Basic Information


Item Value
RNA id TU29867
length 223
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G23854
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 18829865 ~ 18830087 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tcttgtggattggtatgacatttgctgtcttccagtcagtcggcacatcccctgttctaagtgtcatttggaatatttgacttagcggcctataaataatttccctaatttctttaagtactgttggaaatataccatctggcccaggtgatttgtttgtttttaattctgctagtccctttagtacctcctcctcatgtatcctgatctctcttagggtttg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU29851 lncRNA downstream 44728 18781214 ~ 18785137 (-) True G23843
TU29850 lncRNA downstream 48773 18780837 ~ 18781092 (-) True G23842
TU29848 lncRNA downstream 50257 18779171 ~ 18779608 (-) True G23840
TU29847 lncRNA downstream 51796 18777845 ~ 18778069 (-) True G23839
TU29820 lncRNA downstream 115497 18712077 ~ 18714368 (-) True G23813
TU29883 lncRNA upstream 36680 18866767 ~ 18867479 (-) True G23867
TU29891 lncRNA upstream 71278 18901365 ~ 18901597 (-) True G23875
TU30035 lncRNA upstream 649927 19480014 ~ 19481087 (-) True G23982
TU30064 lncRNA upstream 749694 19579781 ~ 19579984 (-) True G24003
TU30182 lncRNA upstream 961614 19791701 ~ 19797576 (-) True AMCG00007481
AMCG00007448 mRNA downstream 6259 18815851 ~ 18823606 (-) True AMCG00007448
AMCG00007449 mRNA downstream 19294 18791578 ~ 18810571 (-) True AMCG00007449
AMCG00007445 mRNA downstream 96846 18714615 ~ 18733019 (-) True AMCG00007445
AMCG00007442 mRNA downstream 195896 18624723 ~ 18633969 (-) True AMCG00007442
AMCG00007441 mRNA downstream 215919 18597275 ~ 18613946 (-) True AMCG00007441
AMCG00007457 mRNA upstream 190633 19020720 ~ 19023092 (-) True AMCG00007457
AMCG00007455 mRNA upstream 193811 19023898 ~ 19025640 (-) True AMCG00007455
AMCG00007454 mRNA upstream 219985 19050072 ~ 19056271 (-) True AMCG00007454
AMCG00007456 mRNA upstream 228170 19058257 ~ 19074146 (-) True AMCG00007456
AMCG00007462 mRNA upstream 257115 19087202 ~ 19101380 (-) True AMCG00007462
TU29846 other downstream 52227 18776360 ~ 18777638 (-) True G23838
TU29633 other downstream 770916 18055470 ~ 18058949 (-) True G23661
TU29265 other downstream 2207960 16530174 ~ 16621905 (-) False AMCG00007375
TU29239 other downstream 2507214 16320997 ~ 16322651 (-) False AMCG00007365
TU30203 other upstream 1085059 19915146 ~ 19923153 (-) True AMCG00007487
TU30340 other upstream 1501426 20331513 ~ 20331811 (-) True G24217
TU30382 other upstream 1641024 20471111 ~ 20472704 (-) True AMCG00007500
TU31390 other upstream 5141584 23971671 ~ 23972665 (-) True G25026
TU31562 other upstream 5435737 24265824 ~ 24267921 (-) False AMCG00007637

Expression Profile