Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU30397 |
| length | 741 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G24256 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 20492904 ~ 20494005 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0044237 | cellular metabolic process | biological_process |
| GO:0071704 | organic substance metabolic process | biological_process |
| GO:0043170 | macromolecule metabolic process | biological_process |
| GO:0006807 | nitrogen compound metabolic process | biological_process |
| GO:0034641 | cellular nitrogen compound metabolic process | biological_process |
| id | description |
|---|---|
| ko03040 | Spliceosome |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU30401 | lncRNA | upstream | 287 | 20492396 ~ 20492617 (+) | True | G24258 |
| TU30396 | lncRNA | upstream | 3148 | 20489297 ~ 20489756 (+) | True | G24255 |
| TU30395 | lncRNA | upstream | 3702 | 20488531 ~ 20489202 (+) | True | G24254 |
| TU30394 | lncRNA | upstream | 4527 | 20487805 ~ 20488377 (+) | True | G24253 |
| TU30393 | lncRNA | upstream | 5221 | 20487145 ~ 20487683 (+) | True | G24252 |
| TU30469 | lncRNA | downstream | 382579 | 20876584 ~ 20876785 (+) | True | G24310 |
| TU30470 | lncRNA | downstream | 386541 | 20880546 ~ 20880924 (+) | True | G24311 |
| TU30569 | lncRNA | downstream | 892220 | 21386225 ~ 21398047 (+) | True | G24384 |
| TU30809 | lncRNA | downstream | 1638030 | 22132035 ~ 22134704 (+) | False | AMCG00007547 |
| TU30811 | lncRNA | downstream | 1650834 | 22144839 ~ 22147346 (+) | True | G24570 |
| AMCG00007505 | mRNA | upstream | 5866 | 20472817 ~ 20487038 (+) | True | AMCG00007505 |
| AMCG00007506 | mRNA | upstream | 22079 | 20466726 ~ 20470825 (+) | True | AMCG00007506 |
| AMCG00007509 | mRNA | upstream | 29951 | 20461259 ~ 20462953 (+) | True | AMCG00007509 |
| AMCG00007501 | mRNA | upstream | 45984 | 20441503 ~ 20446920 (+) | True | AMCG00007501 |
| AMCG00007498 | mRNA | upstream | 64358 | 20415364 ~ 20428546 (+) | True | AMCG00007498 |
| AMCG00007504 | mRNA | downstream | 10894 | 20504899 ~ 20512359 (+) | True | AMCG00007504 |
| AMCG00007503 | mRNA | downstream | 19728 | 20513733 ~ 20518119 (+) | True | AMCG00007503 |
| AMCG00007512 | mRNA | downstream | 506009 | 21000014 ~ 21009567 (+) | True | AMCG00007512 |
| AMCG00007513 | mRNA | downstream | 554914 | 21048919 ~ 21056851 (+) | True | AMCG00007513 |
| AMCG00007514 | mRNA | downstream | 566154 | 21060159 ~ 21066747 (+) | True | AMCG00007514 |
| TU29920 | other | upstream | 1436771 | 19051342 ~ 19056133 (+) | True | G23893 |
| TU29768 | other | upstream | 1922440 | 18567769 ~ 18570464 (+) | False | AMCG00007433 |
| TU29705 | other | upstream | 2200566 | 18290108 ~ 18292338 (+) | True | G23724 |
| TU29676 | other | upstream | 2284596 | 18207078 ~ 18208308 (+) | True | G23698 |
| TU29675 | other | upstream | 2290944 | 18198768 ~ 18201960 (+) | True | AMCG00007417 |
| TU30494 | other | downstream | 566396 | 21060401 ~ 21066783 (+) | False | AMCG00007514 |
| TU30868 | other | downstream | 1787695 | 22281700 ~ 22282958 (+) | True | G24606 |
| TU31151 | other | downstream | 2695455 | 23189460 ~ 23193521 (+) | True | G24824 |
| TU31514 | other | downstream | 3698216 | 24192221 ~ 24194481 (+) | True | AMCG00007631 |
| TU32400 | other | downstream | 7589817 | 28083822 ~ 28094741 (+) | True | G25822 |
