RNA id: TU30868



Basic Information


Item Value
RNA id TU30868
length 638
RNA type TUCP
GC content 0.53
exon number 2
gene id G24606
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 22281700 ~ 22282958 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATCCAGCCGTCTGGAAGCCCAGGCACACTCCTGCCCATCTCTTCGCTCCGTGCTCGAGTCAGGGGCTCACGCTTGACTTGACTGATGAGGACGTTCTCTGGAGAAGACTCACGAGACATCTTATTTGCCTTTGAGTCTGCACTCCGATCTTTCTGCTgcccttgctctctctcttccttcagtttcttctcctgctcttccttcTCTGCCTGCAGTTTCTTCCTTTCCAGATCCTCCTTGTGTTGGccatctttctctttctttaccTTCCGCTCTCTGTCTTCCTTCTCCCggtcctccctctccctgcgcTCCTCCTGCTCCTTCTCCCCCTTCAGCCTCTGCTCCTGCCTCTCCTTCTCCAACCTCTCGTCCTCCCTGCGCTGGTCTTCCTGCGCCTGCCTCTCACGCTTCCTGTGCTCTTGCTCCATTTTGGCCTTTTCAATGATGTGAGTGGCTTCGGCGTGGATCTGGCTCCTCTCCTCGTCTGTCAGAGAGTTTTTGATTGCCAGCGCTGGCTTTATAGAGCGGTCGGGAATGACAGGTCCATTCTGGATTGGTGTTTGGTCCTTATTTGTGGCATCATTATTTGGTCTGACACCATCAGATACTTTGACTGAAGGTTTTTTACTGCGATC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU30862 lncRNA upstream 15291 22263841 ~ 22266409 (+) False AMCG00007553
TU30852 lncRNA upstream 77761 22189245 ~ 22203939 (+) False AMCG00007554
TU30854 lncRNA upstream 77761 22189245 ~ 22203939 (+) False AMCG00007554
TU30853 lncRNA upstream 77761 22191380 ~ 22203939 (+) True AMCG00007554
TU30812 lncRNA upstream 133462 22144839 ~ 22148238 (+) False G24570
TU30934 lncRNA downstream 57778 22340736 ~ 22343616 (+) False G24654
TU30935 lncRNA downstream 57778 22340736 ~ 22342563 (+) True G24654
TU30982 lncRNA downstream 167149 22450107 ~ 22450404 (+) True G24692
TU30983 lncRNA downstream 170858 22453816 ~ 22454055 (+) True G24693
TU30985 lncRNA downstream 172308 22455266 ~ 22456761 (+) True G24695
AMCG00007556 mRNA upstream 7521 22268514 ~ 22274179 (+) True AMCG00007556
AMCG00007553 mRNA upstream 15414 22263520 ~ 22266286 (+) True AMCG00007553
AMCG00007557 mRNA upstream 19847 22232527 ~ 22261853 (+) True AMCG00007557
AMCG00007555 mRNA upstream 65460 22204776 ~ 22216240 (+) True AMCG00007555
AMCG00007554 mRNA upstream 77749 22191403 ~ 22203951 (+) False AMCG00007554
AMCG00007560 mRNA downstream 13096 22296054 ~ 22307259 (+) True AMCG00007560
AMCG00007559 mRNA downstream 39766 22322724 ~ 22331465 (+) True AMCG00007559
AMCG00007561 mRNA downstream 70654 22353612 ~ 22364194 (+) True AMCG00007561
AMCG00007562 mRNA downstream 125970 22408928 ~ 22431845 (+) True AMCG00007562
AMCG00007563 mRNA downstream 159037 22441995 ~ 22448954 (+) True AMCG00007563
TU30494 other upstream 1214917 21060401 ~ 21066783 (+) False AMCG00007514
TU29920 other upstream 3225567 19051342 ~ 19056133 (+) True G23893
TU29768 other upstream 3711236 18567769 ~ 18570464 (+) False AMCG00007433
TU29705 other upstream 3989362 18290108 ~ 18292338 (+) True G23724
TU29676 other upstream 4073392 18207078 ~ 18208308 (+) True G23698
TU31151 other downstream 906502 23189460 ~ 23193521 (+) True G24824
TU31514 other downstream 1909263 24192221 ~ 24194481 (+) True AMCG00007631
TU32400 other downstream 5800864 28083822 ~ 28094741 (+) True G25822
TU32501 other downstream 6170051 28453009 ~ 28454707 (+) False AMCG00007735
TU32711 other downstream 6720137 29003095 ~ 29003773 (+) True AMCG00007769

Expression Profile