RNA id: TU30974


Basic Information

Item Value
RNA id TU30974
length 247
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G24687
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 22432067 ~ 22432313 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTTAAATTGATGAAATACATGCCCTAGCCACTGTGATTTCCCTGATTTGCATCACTCCTCTGATGGAAATGCCTGGCACTCACTGCAGTGCCAGAACCTCTAATCAGAAGTCCTGTTGGTCTGGAAAGTACTCAAGCAAAACTGTTTAGAGAACCTATGATTGGACGTTTTCTATTGAAGAAAATTATTCTCTTTCAAAAGCAGGCTCTATTACATAGTACCCCATAAAACACTTGGCATGTATTAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU30958 lncRNA downstream 73621 22355450 ~ 22358446 (-) False AMCG00007565
TU30913 lncRNA downstream 169574 22260847 ~ 22262493 (-) True G24640
TU30830 lncRNA downstream 298086 22131389 ~ 22133981 (-) True G24579
TU30831 lncRNA downstream 298086 22131389 ~ 22133981 (-) False G24579
TU30786 lncRNA downstream 422634 22005734 ~ 22009433 (-) True G24551
TU30996 lncRNA upstream 14057 22446370 ~ 22448954 (-) True G24705
TU31016 lncRNA upstream 86109 22518422 ~ 22521084 (-) True G24721
TU31045 lncRNA upstream 131778 22564091 ~ 22576454 (-) False AMCG00007572
TU31117 lncRNA upstream 521772 22954085 ~ 22954844 (-) True G24797
TU31120 lncRNA upstream 613800 23046113 ~ 23046373 (-) True G24800
AMCG00007565 mRNA downstream 74657 22340599 ~ 22357410 (-) True AMCG00007565
AMCG00007566 mRNA downstream 94993 22332066 ~ 22337074 (-) True AMCG00007566
AMCG00007558 mRNA downstream 143831 22276111 ~ 22288236 (-) True AMCG00007558
AMCG00007552 mRNA downstream 250946 22177466 ~ 22181121 (-) True AMCG00007552
AMCG00007550 mRNA downstream 278567 22144749 ~ 22153500 (-) True AMCG00007550
AMCG00007564 mRNA upstream 16972 22449285 ~ 22470431 (-) True AMCG00007564
AMCG00007571 mRNA upstream 43097 22475410 ~ 22487415 (-) True AMCG00007571
AMCG00007573 mRNA upstream 100343 22532656 ~ 22535178 (-) True AMCG00007573
AMCG00007574 mRNA upstream 113221 22545534 ~ 22551557 (-) True AMCG00007574
AMCG00007572 mRNA upstream 129183 22561496 ~ 22576449 (-) True AMCG00007572
TU30382 other downstream 1959363 20471111 ~ 20472704 (-) True AMCG00007500
TU30340 other downstream 2100256 20331513 ~ 20331811 (-) True G24217
TU30203 other downstream 2508914 19915146 ~ 19923153 (-) True AMCG00007487
TU29846 other downstream 3654429 18776360 ~ 18777638 (-) True G23838
TU29633 other downstream 4373118 18055470 ~ 18058949 (-) True G23661
TU31390 other upstream 1539358 23971671 ~ 23972665 (-) True G25026
TU31562 other upstream 1833511 24265824 ~ 24267921 (-) False AMCG00007637
TU31883 other upstream 2832019 25264332 ~ 25264951 (-) True G25422
TU31949 other upstream 3198482 25630795 ~ 25631592 (-) True AMCG00007684
TU33771 other upstream 12437122 34869435 ~ 34869807 (-) True G26961

Expression Profile