RNA id: TU31385



Basic Information


Item Value
RNA id TU31385
length 203
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G25021
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 23957980 ~ 23958182 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCCGTCCACTGTTGCTCTATGGCCCTGATGTGCGCCTCAGTGAATTTCCAGTAATGCGCCAGCTTCTTCCACTCGTTGGGCTTGAGGTATTTGGTTGCGAGTCTCCACATGACGGAGCGGATGTGCTGGGTCTCCAGCCTGTGGTCCTGCTTGAAGGTCAGATGTTTGCCCACCCAGGAGTCGGAGTCGCTGTTCAGATTGTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU31383 lncRNA downstream 2568 23954421 ~ 23955412 (-) True G25019
TU31375 lncRNA downstream 31743 23924239 ~ 23926237 (-) True G25014
TU31311 lncRNA downstream 244686 23713039 ~ 23713294 (-) True G24955
TU31309 lncRNA downstream 247885 23709508 ~ 23710095 (-) True G24953
TU31296 lncRNA downstream 287898 23667374 ~ 23670082 (-) True G24943
TU31388 lncRNA upstream 294 23958476 ~ 23960843 (-) True G25024
TU31433 lncRNA upstream 72853 24031035 ~ 24031304 (-) True G25058
TU31450 lncRNA upstream 89478 24047660 ~ 24048480 (-) True G25075
TU31451 lncRNA upstream 91042 24049224 ~ 24049437 (-) True G25076
TU31452 lncRNA upstream 91371 24049553 ~ 24049784 (-) True G25077
AMCG00007609 mRNA downstream 71313 23845592 ~ 23886667 (-) True AMCG00007609
AMCG00007610 mRNA downstream 123342 23831169 ~ 23834638 (-) True AMCG00007610
AMCG00007608 mRNA downstream 130265 23822491 ~ 23827715 (-) True AMCG00007608
AMCG00007607 mRNA downstream 136505 23819042 ~ 23821475 (-) True AMCG00007607
AMCG00007611 mRNA downstream 176895 23772732 ~ 23781085 (-) True AMCG00007611
AMCG00007615 mRNA upstream 3785 23961967 ~ 23966643 (-) True AMCG00007615
AMCG00007628 mRNA upstream 38746 23996928 ~ 23997392 (-) True AMCG00007628
AMCG00007623 mRNA upstream 46657 24004839 ~ 24011628 (-) True AMCG00007623
AMCG00007627 mRNA upstream 59283 24017465 ~ 24021945 (-) True AMCG00007627
AMCG00007626 mRNA upstream 64371 24022553 ~ 24030570 (-) True AMCG00007626
TU30382 other downstream 3485276 20471111 ~ 20472704 (-) True AMCG00007500
TU30340 other downstream 3626169 20331513 ~ 20331811 (-) True G24217
TU30203 other downstream 4034827 19915146 ~ 19923153 (-) True AMCG00007487
TU29846 other downstream 5180342 18776360 ~ 18777638 (-) True G23838
TU29633 other downstream 5899031 18055470 ~ 18058949 (-) True G23661
TU31390 other upstream 13489 23971671 ~ 23972665 (-) True G25026
TU31562 other upstream 307642 24265824 ~ 24267921 (-) False AMCG00007637
TU31883 other upstream 1306150 25264332 ~ 25264951 (-) True G25422
TU31949 other upstream 1672613 25630795 ~ 25631592 (-) True AMCG00007684
TU33771 other upstream 10911253 34869435 ~ 34869807 (-) True G26961

Expression Profile