RNA id: TU31390



Basic Information


Item Value
RNA id TU31390
length 379
RNA type TUCP
GC content 0.45
exon number 2
gene id G25026
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 23971671 ~ 23972665 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GGAAATGGAGCTCCCTCTTGTAAGGCACGGTTTGTTTTGGCGCCTCCTTTACTGTACCAACCTCGTGGTGTCAAGGAGGCTTGTTTCTCCACTTCTGCCTGCTGCCTCATGCTGGCTGGGATATTGTTGTAAATACGTTTGTAGTGATTGTATACAGCCACTGAGAGCACTTTCTTTGCATAGGATTGGCCAACAACATACTTATCAAGATAGGCGTAGATCTTTTTTTGGTGGAGGAGGGGGCTTCTGTTGGAATGCCAGCTTTACTGCTTCAGCAGCTGATTCTGGCTCTTTATTTATACTCTTCTTTGAGTCAGTTTCTGACAGCACAACAAAAAAGTGATggcatttttcacatttcacaaagcGGGTTGAAGCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU31388 lncRNA downstream 10828 23958476 ~ 23960843 (-) True G25024
TU31385 lncRNA downstream 13489 23957980 ~ 23958182 (-) True G25021
TU31383 lncRNA downstream 16259 23954421 ~ 23955412 (-) True G25019
TU31375 lncRNA downstream 45434 23924239 ~ 23926237 (-) True G25014
TU31311 lncRNA downstream 258377 23713039 ~ 23713294 (-) True G24955
TU31433 lncRNA upstream 58370 24031035 ~ 24031304 (-) True G25058
TU31450 lncRNA upstream 74995 24047660 ~ 24048480 (-) True G25075
TU31451 lncRNA upstream 76559 24049224 ~ 24049437 (-) True G25076
TU31452 lncRNA upstream 76888 24049553 ~ 24049784 (-) True G25077
TU31453 lncRNA upstream 77150 24049815 ~ 24050073 (-) True G25078
AMCG00007615 mRNA downstream 5028 23961967 ~ 23966643 (-) True AMCG00007615
AMCG00007609 mRNA downstream 85004 23845592 ~ 23886667 (-) True AMCG00007609
AMCG00007610 mRNA downstream 137033 23831169 ~ 23834638 (-) True AMCG00007610
AMCG00007608 mRNA downstream 143956 23822491 ~ 23827715 (-) True AMCG00007608
AMCG00007607 mRNA downstream 150196 23819042 ~ 23821475 (-) True AMCG00007607
AMCG00007628 mRNA upstream 24263 23996928 ~ 23997392 (-) True AMCG00007628
AMCG00007623 mRNA upstream 32174 24004839 ~ 24011628 (-) True AMCG00007623
AMCG00007627 mRNA upstream 44800 24017465 ~ 24021945 (-) True AMCG00007627
AMCG00007626 mRNA upstream 49888 24022553 ~ 24030570 (-) True AMCG00007626
AMCG00007624 mRNA upstream 59888 24032553 ~ 24045372 (-) True AMCG00007624
TU30382 other downstream 3498967 20471111 ~ 20472704 (-) True AMCG00007500
TU30340 other downstream 3639860 20331513 ~ 20331811 (-) True G24217
TU30203 other downstream 4048518 19915146 ~ 19923153 (-) True AMCG00007487
TU29846 other downstream 5194033 18776360 ~ 18777638 (-) True G23838
TU29633 other downstream 5912722 18055470 ~ 18058949 (-) True G23661
TU31562 other upstream 293159 24265824 ~ 24267921 (-) False AMCG00007637
TU31883 other upstream 1291667 25264332 ~ 25264951 (-) True G25422
TU31949 other upstream 1658130 25630795 ~ 25631592 (-) True AMCG00007684
TU33771 other upstream 10896770 34869435 ~ 34869807 (-) True G26961
TU34246 other upstream 13267424 37240089 ~ 37242983 (-) False AMCG00007929

Expression Profile