RNA id: TU31453



Basic Information


Item Value
RNA id TU31453
length 259
lncRNA type inter_gene
GC content 0.58
exon number 1
gene id G25078
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24049815 ~ 24050073 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTTATGATAGGAAAAAGCAACTCGCTTCTTACTTGCGGATGAAGACAGGTTTGAGGCGCGGCTCAGCCTCGTCCTCGCTGTCTGTGTATTCCTCGTACTCCGACTCAGACTCAGACTCCTCTCCCGATttgccctcctcctccacctccatcAGCTCCATGTCCTCTGTCTTGCGCTCCTGTGCTCGCTGGCGCATCATGGCTCGCCGCCTCTCGATTTCCTGCACACCAGGGATGTGGGGGGTGGGTCACACAATGCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU31452 lncRNA downstream 31 24049553 ~ 24049784 (-) True G25077
TU31451 lncRNA downstream 378 24049224 ~ 24049437 (-) True G25076
TU31450 lncRNA downstream 1335 24047660 ~ 24048480 (-) True G25075
TU31433 lncRNA downstream 18511 24031035 ~ 24031304 (-) True G25058
TU31388 lncRNA downstream 88972 23958476 ~ 23960843 (-) True G25024
TU31454 lncRNA upstream 75 24050148 ~ 24050436 (-) True G25079
TU31569 lncRNA upstream 297026 24347099 ~ 24347419 (-) True G25175
TU31570 lncRNA upstream 299957 24350030 ~ 24354310 (-) True G25176
TU31571 lncRNA upstream 318096 24368169 ~ 24368373 (-) True G25177
TU31655 lncRNA upstream 383007 24433080 ~ 24507819 (-) True G25239
AMCG00007624 mRNA downstream 4443 24032553 ~ 24045372 (-) True AMCG00007624
AMCG00007626 mRNA downstream 19245 24022553 ~ 24030570 (-) True AMCG00007626
AMCG00007627 mRNA downstream 27870 24017465 ~ 24021945 (-) True AMCG00007627
AMCG00007623 mRNA downstream 38187 24004839 ~ 24011628 (-) True AMCG00007623
AMCG00007628 mRNA downstream 52423 23996928 ~ 23997392 (-) True AMCG00007628
AMCG00007625 mRNA upstream 2399 24052472 ~ 24055090 (-) True AMCG00007625
AMCG00007629 mRNA upstream 28079 24078152 ~ 24100673 (-) True AMCG00007629
AMCG00007630 mRNA upstream 64482 24114555 ~ 24148021 (-) True AMCG00007630
AMCG00007635 mRNA upstream 100271 24150344 ~ 24186890 (-) True AMCG00007635
AMCG00007634 mRNA upstream 201393 24251466 ~ 24256041 (-) True AMCG00007634
TU31390 other downstream 77150 23971671 ~ 23972665 (-) True G25026
TU30382 other downstream 3577111 20471111 ~ 20472704 (-) True AMCG00007500
TU30340 other downstream 3718004 20331513 ~ 20331811 (-) True G24217
TU30203 other downstream 4126662 19915146 ~ 19923153 (-) True AMCG00007487
TU29846 other downstream 5272177 18776360 ~ 18777638 (-) True G23838
TU31562 other upstream 215751 24265824 ~ 24267921 (-) False AMCG00007637
TU31883 other upstream 1214259 25264332 ~ 25264951 (-) True G25422
TU31949 other upstream 1580722 25630795 ~ 25631592 (-) True AMCG00007684
TU33771 other upstream 10819362 34869435 ~ 34869807 (-) True G26961
TU34246 other upstream 13190016 37240089 ~ 37242983 (-) False AMCG00007929

Expression Profile