RNA id: TU31459



Basic Information


Item Value
RNA id TU31459
length 251
lncRNA type inter_gene
GC content 0.57
exon number 2
gene id G25084
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24085407 ~ 24087304 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CGGCAATCTGGCTGTGGCTCTGGTACACACTGTGGTGGTGCAGGCAGGTGGAATTGTGGCCCCCGCACACCATACAGGCatcttccttctgctctgagcCCAGGATGAGGTCACAGCCAGGTTCAAACAGCGTCCATTGACACAGACTCCGCCGGGCTCTGTCTGGCAAGGTGTTCCATCCAGAACTCGCCCAAAGTTATAGTAGAAATTGTTCCCAACTGCCAGGCAGCTCAGCTCACAGGGGTTGGAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU31444 lncRNA upstream 38798 24044989 ~ 24046609 (+) True G25069
TU31428 lncRNA upstream 54103 24031034 ~ 24031304 (+) True G25056
TU31374 lncRNA upstream 159253 23924239 ~ 23926154 (+) True G25013
TU31372 lncRNA upstream 162182 23921920 ~ 23923225 (+) True G25011
TU31358 lncRNA upstream 221614 23860682 ~ 23863793 (+) True G24997
TU31480 lncRNA downstream 63039 24150343 ~ 24153848 (+) True G25103
TU31520 lncRNA downstream 124378 24211682 ~ 24213444 (+) True G25134
TU31525 lncRNA downstream 141332 24228636 ~ 24228910 (+) True G25138
TU31536 lncRNA downstream 167486 24254790 ~ 24255913 (+) True G25148
TU31598 lncRNA downstream 353993 24441297 ~ 24469767 (+) True G25196
AMCG00007622 mRNA upstream 8059 24056196 ~ 24077348 (+) True AMCG00007622
AMCG00007618 mRNA upstream 33580 24048234 ~ 24051827 (+) True AMCG00007618
AMCG00007620 mRNA upstream 41006 24041906 ~ 24044401 (+) True AMCG00007620
AMCG00007621 mRNA upstream 68794 24013330 ~ 24016613 (+) True AMCG00007621
AMCG00007619 mRNA upstream 78097 23997437 ~ 24007310 (+) True AMCG00007619
AMCG00007631 mRNA downstream 104988 24192292 ~ 24194481 (+) False AMCG00007631
AMCG00007633 mRNA downstream 142218 24229522 ~ 24230585 (+) True AMCG00007633
AMCG00007632 mRNA downstream 168842 24256146 ~ 24261899 (+) True AMCG00007632
AMCG00007636 mRNA downstream 249257 24336561 ~ 24349947 (+) True AMCG00007636
AMCG00007638 mRNA downstream 362018 24449322 ~ 24461405 (+) True AMCG00007638
TU31151 other upstream 891886 23189460 ~ 23193521 (+) True G24824
TU30868 other upstream 1802449 22281700 ~ 22282958 (+) True G24606
TU30494 other upstream 3018624 21060401 ~ 21066783 (+) False AMCG00007514
TU29920 other upstream 5029274 19051342 ~ 19056133 (+) True G23893
TU29768 other upstream 5514943 18567769 ~ 18570464 (+) False AMCG00007433
TU31514 other downstream 104917 24192221 ~ 24194481 (+) True AMCG00007631
TU32400 other downstream 3996518 28083822 ~ 28094741 (+) True G25822
TU32501 other downstream 4365705 28453009 ~ 28454707 (+) False AMCG00007735
TU32711 other downstream 4915791 29003095 ~ 29003773 (+) True AMCG00007769
TU32939 other downstream 5678524 29765828 ~ 29775035 (+) False G26258

Expression Profile