RNA id: TU31655



Basic Information


Item Value
RNA id TU31655
length 251
lncRNA type read_through
GC content 0.45
exon number 3
gene id G25239
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24433080 ~ 24507819 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTGCTGTTAATCCGCAGACCTCGCTGCTGTGACTCCCCTCCAATCTCAGCCGGAGACCAAACACAGATCTGTTTCCACtgagaaaacactgaaacttGCTTACTgtgggagaaaagaaaagaaaaacagactcGGGATTCCGCACAATATGAAAACTAACGCTGTTCAGCTTTACCCACCGCTTGTCCTggtctttttgtttgtctgtggcATTTGCACAGTGAATGGAGATTACTGTAATGTGAATCACT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU31571 lncRNA downstream 64707 24368169 ~ 24368373 (-) True G25177
TU31570 lncRNA downstream 78770 24350030 ~ 24354310 (-) True G25176
TU31569 lncRNA downstream 85661 24347099 ~ 24347419 (-) True G25175
TU31454 lncRNA downstream 382644 24050148 ~ 24050436 (-) True G25079
TU31453 lncRNA downstream 383007 24049815 ~ 24050073 (-) True G25078
TU31821 lncRNA upstream 474115 24981934 ~ 24982139 (-) True G25375
TU31834 lncRNA upstream 481026 24988845 ~ 24989054 (-) True G25387
TU31874 lncRNA upstream 699955 25207774 ~ 25245930 (-) False G25415
TU31876 lncRNA upstream 699955 25207774 ~ 25247379 (-) True G25415
TU31882 lncRNA upstream 744897 25252716 ~ 25256361 (-) True G25421
AMCG00007644 mRNA downstream 29958 24368631 ~ 24403122 (-) True AMCG00007644
AMCG00007637 mRNA downstream 151516 24262690 ~ 24281564 (-) True AMCG00007637
AMCG00007634 mRNA downstream 177039 24251466 ~ 24256041 (-) True AMCG00007634
AMCG00007635 mRNA downstream 246190 24150344 ~ 24186890 (-) True AMCG00007635
AMCG00007630 mRNA downstream 285059 24114555 ~ 24148021 (-) True AMCG00007630
AMCG00007647 mRNA upstream 38713 24546532 ~ 24550224 (-) True AMCG00007647
AMCG00007642 mRNA upstream 51236 24559055 ~ 24562456 (-) True AMCG00007642
AMCG00007646 mRNA upstream 55976 24563795 ~ 24570297 (-) True AMCG00007646
AMCG00007652 mRNA upstream 106681 24614500 ~ 24624473 (-) True AMCG00007652
AMCG00007651 mRNA upstream 121687 24629506 ~ 24645364 (-) True AMCG00007651
TU31562 other downstream 165159 24265824 ~ 24267921 (-) False AMCG00007637
TU31390 other downstream 460415 23971671 ~ 23972665 (-) True G25026
TU30382 other downstream 3960376 20471111 ~ 20472704 (-) True AMCG00007500
TU30340 other downstream 4101269 20331513 ~ 20331811 (-) True G24217
TU30203 other downstream 4509927 19915146 ~ 19923153 (-) True AMCG00007487
TU31883 other upstream 756513 25264332 ~ 25264951 (-) True G25422
TU31949 other upstream 1122976 25630795 ~ 25631592 (-) True AMCG00007684
TU33771 other upstream 10361616 34869435 ~ 34869807 (-) True G26961
TU34246 other upstream 12732270 37240089 ~ 37242983 (-) False AMCG00007929
TU34303 other upstream 12987092 37494911 ~ 37499392 (-) True G27416

Expression Profile