RNA id: TU31834


Basic Information

Item Value
RNA id TU31834
length 210
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G25387
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24988845 ~ 24989054 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

caggactgCAAACTTTTTCATTTCCTCCTAGGATACACTTGCTTAAAGTTCAGTGACTTTAAATCTTTTTACCCATCTCTAAAGAGAATGTATAAAGTTTCAACCGGTCCATGTGTAACGGACATTGCCAATGtgaggtgtgtgtatatatagggaCTTCAACAATGCACAAAGAACTGAAACCAGATCAAgggaagcatttaaaaaaaa

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU31821 lncRNA downstream 6706 24981934 ~ 24982139 (-) True G25375
TU31671 lncRNA downstream 446687 24498365 ~ 24542158 (-) True G25248
TU31655 lncRNA downstream 481026 24433080 ~ 24507819 (-) True G25239
TU31571 lncRNA downstream 620472 24368169 ~ 24368373 (-) True G25177
TU31570 lncRNA downstream 634535 24350030 ~ 24354310 (-) True G25176
TU31874 lncRNA upstream 218720 25207774 ~ 25245930 (-) False G25415
TU31876 lncRNA upstream 218720 25207774 ~ 25247379 (-) True G25415
TU31882 lncRNA upstream 263662 25252716 ~ 25256361 (-) True G25421
TU31916 lncRNA upstream 462709 25451763 ~ 25452022 (-) True G25446
TU32026 lncRNA upstream 1064710 26053764 ~ 26069317 (-) True AMCG00007687
AMCG00007668 mRNA downstream 9508 24966872 ~ 24979337 (-) True AMCG00007668
AMCG00007666 mRNA downstream 43049 24934308 ~ 24945796 (-) True AMCG00007666
AMCG00007661 mRNA downstream 178378 24805791 ~ 24810467 (-) True AMCG00007661
AMCG00007662 mRNA downstream 186467 24799840 ~ 24802378 (-) True AMCG00007662
AMCG00007656 mRNA downstream 209228 24761918 ~ 24779617 (-) True AMCG00007656
AMCG00007667 mRNA upstream 458 24989512 ~ 25006830 (-) True AMCG00007667
AMCG00007677 mRNA upstream 334034 25323088 ~ 25334806 (-) True AMCG00007677
AMCG00007678 mRNA upstream 350308 25339362 ~ 25355884 (-) True AMCG00007678
AMCG00007679 mRNA upstream 370725 25359779 ~ 25362397 (-) True AMCG00007679
AMCG00007675 mRNA upstream 375983 25365037 ~ 25380395 (-) True AMCG00007675
TU31562 other downstream 720924 24265824 ~ 24267921 (-) False AMCG00007637
TU31390 other downstream 1016180 23971671 ~ 23972665 (-) True G25026
TU30382 other downstream 4516141 20471111 ~ 20472704 (-) True AMCG00007500
TU30340 other downstream 4657034 20331513 ~ 20331811 (-) True G24217
TU30203 other downstream 5065692 19915146 ~ 19923153 (-) True AMCG00007487
TU31883 other upstream 275278 25264332 ~ 25264951 (-) True G25422
TU31949 other upstream 641741 25630795 ~ 25631592 (-) True AMCG00007684
TU33771 other upstream 9880381 34869435 ~ 34869807 (-) True G26961
TU34246 other upstream 12251035 37240089 ~ 37242983 (-) False AMCG00007929
TU34303 other upstream 12505857 37494911 ~ 37499392 (-) True G27416

Expression Profile