RNA id: TU32051



Basic Information


Item Value
RNA id TU32051
length 217
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G25561
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 26134361 ~ 26134577 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


cgtcatcttgatcacattccagaggctTTCAATGGAGTTCAGGACTGAAGATTGGGCTGATCATGACcaggtcttgatctggtggtcctccatccacaccttgatttgACCTGGCTGTGTAGCATGGaacattgtcctgctggaaaaaccaatcctcagagttggggaacattgccagagcaggaggaagcaagttgttgagtgacattcgattgag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU32014 lncRNA upstream 73115 26053701 ~ 26061246 (+) True G25531
TU31915 lncRNA upstream 682568 25451533 ~ 25451793 (+) True G25445
TU31861 lncRNA upstream 813336 25315787 ~ 25321025 (+) True G25405
TU31813 lncRNA upstream 1181033 24953125 ~ 24953328 (+) True G25367
TU31742 lncRNA upstream 1192781 24934479 ~ 24941580 (+) True G25302
TU32052 lncRNA downstream 2190 26136767 ~ 26142288 (+) True G25562
TU32065 lncRNA downstream 128250 26262827 ~ 26270720 (+) True G25574
TU32092 lncRNA downstream 178786 26313363 ~ 26313565 (+) True G25588
TU32138 lncRNA downstream 1056592 27191169 ~ 27191379 (+) True G25631
TU32154 lncRNA downstream 1119524 27254101 ~ 27256998 (+) True G25645
AMCG00007692 mRNA upstream 3351 26118096 ~ 26131010 (+) True AMCG00007692
AMCG00007690 mRNA upstream 18753 26096726 ~ 26115608 (+) True AMCG00007690
AMCG00007691 mRNA upstream 50940 26070759 ~ 26083421 (+) True AMCG00007691
AMCG00007686 mRNA upstream 97997 26019814 ~ 26036364 (+) True AMCG00007686
AMCG00007685 mRNA upstream 426223 25698223 ~ 25708138 (+) True AMCG00007685
AMCG00007696 mRNA downstream 1024914 27159491 ~ 27179372 (+) True AMCG00007696
AMCG00007698 mRNA downstream 1080193 27214770 ~ 27226777 (+) True AMCG00007698
AMCG00007697 mRNA downstream 1101417 27235994 ~ 27253888 (+) True AMCG00007697
AMCG00007700 mRNA downstream 1127928 27262505 ~ 27280545 (+) True AMCG00007700
AMCG00007701 mRNA downstream 1182962 27317539 ~ 27324818 (+) True AMCG00007701
TU31514 other upstream 1939880 24192221 ~ 24194481 (+) True AMCG00007631
TU31151 other upstream 2940840 23189460 ~ 23193521 (+) True G24824
TU30868 other upstream 3851403 22281700 ~ 22282958 (+) True G24606
TU30494 other upstream 5067578 21060401 ~ 21066783 (+) False AMCG00007514
TU29920 other upstream 7078228 19051342 ~ 19056133 (+) True G23893
TU32400 other downstream 1949245 28083822 ~ 28094741 (+) True G25822
TU32501 other downstream 2318432 28453009 ~ 28454707 (+) False AMCG00007735
TU32711 other downstream 2868518 29003095 ~ 29003773 (+) True AMCG00007769
TU32939 other downstream 3631251 29765828 ~ 29775035 (+) False G26258
TU33841 other downstream 9476539 35611116 ~ 35620801 (+) False AMCG00007873

Expression Profile