RNA id: TU32121


Basic Information

Item Value
RNA id TU32121
length 241
lncRNA type inter_gene
GC content 0.53
exon number 1
gene id G25615
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 26999306 ~ 26999546 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

accacggagcaatggaggaaggtggcctggtctgatgaatcacgagttcaaggtgttgacttggcctccaaattccccagatctcaatccaatcaagcatctgtgggatgtgctggacaaacaagtccgatccatggaggccccacctcgcaacttacaggacttaaaggatctgctgctaacgtcttggtgccagataccacagcacaccttcagaggtccagtggagtccatgcctcga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU32027 lncRNA downstream 928458 26053764 ~ 26070848 (-) False AMCG00007687
TU32026 lncRNA downstream 929989 26053764 ~ 26069317 (-) True AMCG00007687
TU31916 lncRNA downstream 1547284 25451763 ~ 25452022 (-) True G25446
TU31882 lncRNA downstream 1742945 25252716 ~ 25256361 (-) True G25421
TU31876 lncRNA downstream 1751927 25207774 ~ 25247379 (-) True G25415
TU32123 lncRNA upstream 29425 27028971 ~ 27029294 (-) True G25617
TU32126 lncRNA upstream 70340 27069886 ~ 27070099 (-) True G25620
TU32167 lncRNA upstream 254683 27254229 ~ 27257033 (-) True G25655
TU32217 lncRNA upstream 354422 27353968 ~ 27355254 (-) True G25697
TU32249 lncRNA upstream 358185 27357731 ~ 27370519 (-) False AMCG00007704
AMCG00007695 mRNA downstream 518428 26479031 ~ 26480878 (-) True AMCG00007695
AMCG00007694 mRNA downstream 726856 26262988 ~ 26272450 (-) True AMCG00007694
AMCG00007693 mRNA downstream 837792 26136652 ~ 26161514 (-) True AMCG00007693
AMCG00007687 mRNA downstream 931771 26060929 ~ 26067535 (-) False AMCG00007687
AMCG00007688 mRNA downstream 1103705 25863022 ~ 25895601 (-) True AMCG00007688
AMCG00007699 mRNA upstream 200097 27199643 ~ 27212764 (-) True AMCG00007699
AMCG00007706 mRNA upstream 293881 27293427 ~ 27307131 (-) True AMCG00007706
AMCG00007705 mRNA upstream 325155 27324701 ~ 27334387 (-) True AMCG00007705
AMCG00007704 mRNA upstream 358189 27357735 ~ 27370382 (-) True AMCG00007704
AMCG00007713 mRNA upstream 518992 27518538 ~ 27532721 (-) True AMCG00007713
TU31949 other downstream 1367714 25630795 ~ 25631592 (-) True AMCG00007684
TU31883 other downstream 1734355 25264332 ~ 25264951 (-) True G25422
TU31562 other downstream 2731385 24265824 ~ 24267921 (-) False AMCG00007637
TU31390 other downstream 3026641 23971671 ~ 23972665 (-) True G25026
TU30382 other downstream 6526602 20471111 ~ 20472704 (-) True AMCG00007500
TU33771 other upstream 7869889 34869435 ~ 34869807 (-) True G26961
TU34246 other upstream 10240543 37240089 ~ 37242983 (-) False AMCG00007929
TU34303 other upstream 10495365 37494911 ~ 37499392 (-) True G27416
TU34324 other upstream 10568071 37567617 ~ 37569284 (-) True G27437
TU34326 other upstream 10571411 37570957 ~ 37571488 (-) True G27439

Expression Profile