RNA id: TU32126


Basic Information

Item Value
RNA id TU32126
length 214
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G25620
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 27069886 ~ 27070099 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aaaacgcatttcaaaaaagttataaattgatttgcatgttaatgagggaaataagtatttgatcccctatcaatcagcaagatttctggctcccaggtgtcttttatacgggtaacgagctgagattaggagcactctcttaaagggagcaCTCCCTAATCTCAGCTCCTAATCTCAgttcgttacctgtataaaagacacctgtccacagaag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU32123 lncRNA downstream 40592 27028971 ~ 27029294 (-) True G25617
TU32121 lncRNA downstream 70340 26999306 ~ 26999546 (-) True G25615
TU32027 lncRNA downstream 999038 26053764 ~ 26070848 (-) False AMCG00007687
TU32026 lncRNA downstream 1000569 26053764 ~ 26069317 (-) True AMCG00007687
TU31916 lncRNA downstream 1617864 25451763 ~ 25452022 (-) True G25446
TU32167 lncRNA upstream 184130 27254229 ~ 27257033 (-) True G25655
TU32217 lncRNA upstream 283869 27353968 ~ 27355254 (-) True G25697
TU32249 lncRNA upstream 287632 27357731 ~ 27370519 (-) False AMCG00007704
TU32258 lncRNA upstream 359658 27429757 ~ 27540936 (-) True G25726
TU32264 lncRNA upstream 367909 27438008 ~ 27451511 (-) True G25730
AMCG00007695 mRNA downstream 589008 26479031 ~ 26480878 (-) True AMCG00007695
AMCG00007694 mRNA downstream 797436 26262988 ~ 26272450 (-) True AMCG00007694
AMCG00007693 mRNA downstream 908372 26136652 ~ 26161514 (-) True AMCG00007693
AMCG00007687 mRNA downstream 1002351 26060929 ~ 26067535 (-) False AMCG00007687
AMCG00007688 mRNA downstream 1174285 25863022 ~ 25895601 (-) True AMCG00007688
AMCG00007699 mRNA upstream 129544 27199643 ~ 27212764 (-) True AMCG00007699
AMCG00007706 mRNA upstream 223328 27293427 ~ 27307131 (-) True AMCG00007706
AMCG00007705 mRNA upstream 254602 27324701 ~ 27334387 (-) True AMCG00007705
AMCG00007704 mRNA upstream 287636 27357735 ~ 27370382 (-) True AMCG00007704
AMCG00007713 mRNA upstream 448439 27518538 ~ 27532721 (-) True AMCG00007713
TU31949 other downstream 1438294 25630795 ~ 25631592 (-) True AMCG00007684
TU31883 other downstream 1804935 25264332 ~ 25264951 (-) True G25422
TU31562 other downstream 2801965 24265824 ~ 24267921 (-) False AMCG00007637
TU31390 other downstream 3097221 23971671 ~ 23972665 (-) True G25026
TU30382 other downstream 6597182 20471111 ~ 20472704 (-) True AMCG00007500
TU33771 other upstream 7799336 34869435 ~ 34869807 (-) True G26961
TU34246 other upstream 10169990 37240089 ~ 37242983 (-) False AMCG00007929
TU34303 other upstream 10424812 37494911 ~ 37499392 (-) True G27416
TU34324 other upstream 10497518 37567617 ~ 37569284 (-) True G27437
TU34326 other upstream 10500858 37570957 ~ 37571488 (-) True G27439

Expression Profile