RNA id: TU32191


Basic Information

Item Value
RNA id TU32191
length 432
lncRNA type inter_gene
GC content 0.53
exon number 2
gene id G25674
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 27303848 ~ 27307066 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCTGCATTTCCTGCCATCCACCGTCTCCTCTTCAAACTCCTCTCCGATGTGGAAGTTGATCTCGGTGGTGCGGACGGTGGTGGAGGTTTTGATGTAGAACTGCTCTCCGTTCTGCCTGATCTCTACATGGGGCTTCGAGGCAGCAGCCCCAGCCACCTTCCTCAGCATGGCGTTCACGCctAGCTTTAAGAAGTTCATCAAAATTCTCACTGCTCTTCATCTTCCAGGTTCCGGCAAAGTTGGGCATTTCTGTAGCTGCTGAGGGCTGTGTTGGAGCTGTGAATGAGGAGTCTGGACGCAGTGTCTTGTAGTGTGACAGAAAGAACCTGCTTCTTAGTGCTTGGtgctctgctctctgctctttgcgctctctctcactcacccccctctctctctctctctctctctctctctgcttctgccTCATCTGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU32170 lncRNA upstream 21738 27280657 ~ 27282110 (+) True G25658
TU32154 lncRNA upstream 46850 27254101 ~ 27256998 (+) True G25645
TU32155 lncRNA upstream 46850 27254218 ~ 27256998 (+) False G25645
TU32138 lncRNA upstream 112469 27191169 ~ 27191379 (+) True G25631
TU32092 lncRNA upstream 990283 26313363 ~ 26313565 (+) True G25588
TU32194 lncRNA downstream 21881 27328947 ~ 27330202 (+) True G25677
TU32219 lncRNA downstream 48808 27355874 ~ 27356077 (+) True G25699
TU32235 lncRNA downstream 259629 27566695 ~ 27569353 (+) True G25709
TU32236 lncRNA downstream 259629 27566695 ~ 27569297 (+) False G25709
TU32289 lncRNA downstream 263477 27570543 ~ 27571491 (+) True G25753
AMCG00007700 mRNA upstream 23303 27262505 ~ 27280545 (+) True AMCG00007700
AMCG00007697 mRNA upstream 49960 27235994 ~ 27253888 (+) True AMCG00007697
AMCG00007698 mRNA upstream 77071 27214770 ~ 27226777 (+) True AMCG00007698
AMCG00007696 mRNA upstream 124476 27159491 ~ 27179372 (+) True AMCG00007696
AMCG00007692 mRNA upstream 1172838 26118096 ~ 26131010 (+) True AMCG00007692
AMCG00007701 mRNA downstream 10473 27317539 ~ 27324818 (+) True AMCG00007701
AMCG00007702 mRNA downstream 27859 27334925 ~ 27348351 (+) True AMCG00007702
AMCG00007703 mRNA downstream 44157 27351223 ~ 27355475 (+) True AMCG00007703
AMCG00007707 mRNA downstream 122836 27429902 ~ 27448438 (+) True AMCG00007707
AMCG00007708 mRNA downstream 170945 27478011 ~ 27504969 (+) True AMCG00007708
TU31514 other upstream 3109367 24192221 ~ 24194481 (+) True AMCG00007631
TU31151 other upstream 4110327 23189460 ~ 23193521 (+) True G24824
TU30868 other upstream 5020890 22281700 ~ 22282958 (+) True G24606
TU30494 other upstream 6237065 21060401 ~ 21066783 (+) False AMCG00007514
TU29920 other upstream 8247715 19051342 ~ 19056133 (+) True G23893
TU32400 other downstream 776756 28083822 ~ 28094741 (+) True G25822
TU32501 other downstream 1145943 28453009 ~ 28454707 (+) False AMCG00007735
TU32711 other downstream 1696029 29003095 ~ 29003773 (+) True AMCG00007769
TU32939 other downstream 2458762 29765828 ~ 29775035 (+) False G26258
TU33841 other downstream 8304050 35611116 ~ 35620801 (+) False AMCG00007873

Expression Profile