RNA id: TU32217



Basic Information


Item Value
RNA id TU32217
length 476
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G25697
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 27353968 ~ 27355254 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CAATGTAGTTAACATTGGTATGTGTATATTGAGATTTtcttacagaaaaaaagacaagtaATCAATAGTATTTTGGAAACAAAAATCTGTCAATTTAGAAAAAGGTGAAAAGTCAGGTGCTCATTTatccttttctttctgttccttCTCCTTCTTGTCCCGCTCGGCCTTGGCCTCCTCTGCCTCGTGTTTCTTGATCAGTCCTTCCACCTCCTTCTGCTTCAGGACTTTGATCTTGGTCTTGCCGTTTTCCCTGGTCAGTGTGGCAATTTCCACTTTCTCAGCAGACAGCTTGCTCACATCCATGGTTTTATTCAGCACCTTGACTGCTAAGGCAAGAGCTGATGCTAATGTCATTTCTCCTTCCTTGAAATCCTGCTTCAGCATGGACACAGCAGCCTGCACAAAAAACAGAGAGCACCCATTCATCACTGTAATTCTGACACTCATTCACCCAAGACATATTCTATTAAGCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU32167 lncRNA downstream 96935 27254229 ~ 27257033 (-) True G25655
TU32126 lncRNA downstream 283869 27069886 ~ 27070099 (-) True G25620
TU32123 lncRNA downstream 324674 27028971 ~ 27029294 (-) True G25617
TU32121 lncRNA downstream 354422 26999306 ~ 26999546 (-) True G25615
TU32027 lncRNA downstream 1283120 26053764 ~ 26070848 (-) False AMCG00007687
TU32249 lncRNA upstream 2477 27357731 ~ 27370519 (-) False AMCG00007704
TU32258 lncRNA upstream 74503 27429757 ~ 27540936 (-) True G25726
TU32264 lncRNA upstream 82754 27438008 ~ 27451511 (-) True G25730
TU32269 lncRNA upstream 145696 27500950 ~ 27504962 (-) True G25735
TU32282 lncRNA upstream 198243 27553497 ~ 27554110 (-) True G25746
AMCG00007705 mRNA downstream 19581 27324701 ~ 27334387 (-) True AMCG00007705
AMCG00007706 mRNA downstream 46837 27293427 ~ 27307131 (-) True AMCG00007706
AMCG00007699 mRNA downstream 141204 27199643 ~ 27212764 (-) True AMCG00007699
AMCG00007695 mRNA downstream 873090 26479031 ~ 26480878 (-) True AMCG00007695
AMCG00007694 mRNA downstream 1081518 26262988 ~ 26272450 (-) True AMCG00007694
AMCG00007704 mRNA upstream 2481 27357735 ~ 27370382 (-) True AMCG00007704
AMCG00007713 mRNA upstream 163284 27518538 ~ 27532721 (-) True AMCG00007713
AMCG00007712 mRNA upstream 210913 27566167 ~ 27569541 (-) True AMCG00007712
AMCG00007719 mRNA upstream 312267 27667521 ~ 27672745 (-) True AMCG00007719
AMCG00007722 mRNA upstream 518009 27873263 ~ 27879135 (-) True AMCG00007722
TU31949 other downstream 1722376 25630795 ~ 25631592 (-) True AMCG00007684
TU31883 other downstream 2089017 25264332 ~ 25264951 (-) True G25422
TU31562 other downstream 3086047 24265824 ~ 24267921 (-) False AMCG00007637
TU31390 other downstream 3381303 23971671 ~ 23972665 (-) True G25026
TU30382 other downstream 6881264 20471111 ~ 20472704 (-) True AMCG00007500
TU33771 other upstream 7514181 34869435 ~ 34869807 (-) True G26961
TU34246 other upstream 9884835 37240089 ~ 37242983 (-) False AMCG00007929
TU34303 other upstream 10139657 37494911 ~ 37499392 (-) True G27416
TU34324 other upstream 10212363 37567617 ~ 37569284 (-) True G27437
TU34326 other upstream 10215703 37570957 ~ 37571488 (-) True G27439

Expression Profile