RNA id: TU32285


Basic Information

Item Value
RNA id TU32285
length 451
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G25749
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 27563240 ~ 27563690 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TGCCCTACTTAATAATACTTGATGTCTAATGTCTTAGGGATTATTCTACATAGAGTTTACTATTTTGAGATGCATTTAGCCCGCTAAGAGTAAATCAGTCACTTGACTATAGGTTATTGTGGCAGGACACAGATCAAGTAGCATTGTGgaattctaatttaaaaaaaaaaacacctctgcCAGGTGTGAAATATAACTCCACTTGTCCTGTGTAAGTACAAGTCCTTTCTCTTTGTGACTCTGGGACTCATGGCAGTAAGACTTCAGAAATTGATTTCTCACTAGCAGTGGAAACACAGCACAGTTTGAAATTGAGCATCTTGGCACTTGTGTCAAGGCCAGTGTTGTGGTGCAGGAGCTGTGGACACTCACTCCAGACTGTAGGTCTTGTTTATTGTAGGGAAATGTTTGACTTGCAAGAAATCCAGCATCTCTTGAGGGACATCATCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU32284 lncRNA downstream 222 27562728 ~ 27563018 (-) True G25748
TU32282 lncRNA downstream 9130 27553497 ~ 27554110 (-) True G25746
TU32258 lncRNA downstream 22304 27429757 ~ 27540936 (-) True G25726
TU32269 lncRNA downstream 58278 27500950 ~ 27504962 (-) True G25735
TU32264 lncRNA downstream 111729 27438008 ~ 27451511 (-) True G25730
TU32286 lncRNA upstream 349 27564039 ~ 27564709 (-) True G25750
TU32317 lncRNA upstream 98534 27662224 ~ 27666550 (-) True G25768
TU32318 lncRNA upstream 98534 27662224 ~ 27667072 (-) False G25768
TU32591 lncRNA upstream 1113150 28676840 ~ 28702537 (-) True G25968
TU32595 lncRNA upstream 1132775 28696465 ~ 28699849 (-) True G25972
AMCG00007713 mRNA downstream 30519 27518538 ~ 27532721 (-) True AMCG00007713
AMCG00007704 mRNA downstream 192858 27357735 ~ 27370382 (-) True AMCG00007704
AMCG00007705 mRNA downstream 228853 27324701 ~ 27334387 (-) True AMCG00007705
AMCG00007706 mRNA downstream 256109 27293427 ~ 27307131 (-) True AMCG00007706
AMCG00007699 mRNA downstream 350476 27199643 ~ 27212764 (-) True AMCG00007699
AMCG00007712 mRNA upstream 2477 27566167 ~ 27569541 (-) True AMCG00007712
AMCG00007719 mRNA upstream 103831 27667521 ~ 27672745 (-) True AMCG00007719
AMCG00007722 mRNA upstream 309573 27873263 ~ 27879135 (-) True AMCG00007722
AMCG00007724 mRNA upstream 315570 27879260 ~ 27884397 (-) True AMCG00007724
AMCG00007726 mRNA upstream 493745 28057435 ~ 28063864 (-) True AMCG00007726
TU31949 other downstream 1931648 25630795 ~ 25631592 (-) True AMCG00007684
TU31883 other downstream 2298289 25264332 ~ 25264951 (-) True G25422
TU31562 other downstream 3295319 24265824 ~ 24267921 (-) False AMCG00007637
TU31390 other downstream 3590575 23971671 ~ 23972665 (-) True G25026
TU30382 other downstream 7090536 20471111 ~ 20472704 (-) True AMCG00007500
TU33771 other upstream 7305745 34869435 ~ 34869807 (-) True G26961
TU34246 other upstream 9676399 37240089 ~ 37242983 (-) False AMCG00007929
TU34303 other upstream 9931221 37494911 ~ 37499392 (-) True G27416
TU34324 other upstream 10003927 37567617 ~ 37569284 (-) True G27437
TU34326 other upstream 10007267 37570957 ~ 37571488 (-) True G27439

Expression Profile