RNA id: TU32612


Basic Information

Item Value
RNA id TU32612
length 231
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G25985
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 28732764 ~ 28732994 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cacttactacccaggaacagaaataaaatacaaatttgttaCACGGTGTAAATTGCCAAACAAATCCGCTGAATCCAAGTGCTAAATCCGATTCAAGCCTGGTATAAGGACTGCGACTAACTCGGATTTCACTGTAATAAGAGAGGGGGAAAGTCACCGGAATTAAACCTTTTCAGTTGCACATTTTgagaaaacattatatttaatagtTGCAAGCATATTAACTTGCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU32591 lncRNA downstream 30227 28676840 ~ 28702537 (-) True G25968
TU32595 lncRNA downstream 32915 28696465 ~ 28699849 (-) True G25972
TU32318 lncRNA downstream 1065692 27662224 ~ 27667072 (-) False G25768
TU32317 lncRNA downstream 1066214 27662224 ~ 27666550 (-) True G25768
TU32286 lncRNA downstream 1168055 27564039 ~ 27564709 (-) True G25750
TU32614 lncRNA upstream 1118 28734112 ~ 28734449 (-) True G25987
TU32688 lncRNA upstream 161699 28894693 ~ 28898576 (-) True AMCG00007757
TU32710 lncRNA upstream 268055 29001049 ~ 29001957 (-) False AMCG00007768
TU32742 lncRNA upstream 298416 29031410 ~ 29049165 (-) True G26092
TU32768 lncRNA upstream 497949 29230943 ~ 29232708 (-) True G26115
AMCG00007748 mRNA downstream 58502 28647011 ~ 28674262 (-) True AMCG00007748
AMCG00007749 mRNA downstream 95458 28624088 ~ 28637306 (-) True AMCG00007749
AMCG00007750 mRNA downstream 120523 28595995 ~ 28612241 (-) True AMCG00007750
AMCG00007744 mRNA downstream 151574 28579139 ~ 28581190 (-) True AMCG00007744
AMCG00007742 mRNA downstream 183218 28546752 ~ 28549546 (-) True AMCG00007742
AMCG00007762 mRNA upstream 21486 28754480 ~ 28761777 (-) True AMCG00007762
AMCG00007758 mRNA upstream 44761 28777755 ~ 28843806 (-) True AMCG00007758
AMCG00007761 mRNA upstream 129584 28862578 ~ 28866585 (-) True AMCG00007761
AMCG00007760 mRNA upstream 133610 28866604 ~ 28878017 (-) True AMCG00007760
AMCG00007757 mRNA upstream 164972 28897966 ~ 28921123 (-) False AMCG00007757
TU31949 other downstream 3101172 25630795 ~ 25631592 (-) True AMCG00007684
TU31883 other downstream 3467813 25264332 ~ 25264951 (-) True G25422
TU31562 other downstream 4464843 24265824 ~ 24267921 (-) False AMCG00007637
TU31390 other downstream 4760099 23971671 ~ 23972665 (-) True G25026
TU30382 other downstream 8260060 20471111 ~ 20472704 (-) True AMCG00007500
TU33771 other upstream 6136441 34869435 ~ 34869807 (-) True G26961
TU34246 other upstream 8507095 37240089 ~ 37242983 (-) False AMCG00007929
TU34303 other upstream 8761917 37494911 ~ 37499392 (-) True G27416
TU34324 other upstream 8834623 37567617 ~ 37569284 (-) True G27437
TU34326 other upstream 8837963 37570957 ~ 37571488 (-) True G27439

Expression Profile