RNA id: TU32833


Basic Information

Item Value
RNA id TU32833
length 351
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G26167
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 29367373 ~ 29367723 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CATCTTTGTTGCTGAGATTATCATTAGATATCATCCCATATGAAATCTCACAGTATGTCATTCCGAGTAGCAATATCAGTCAGGTAGGACAACACAGATTAttcttgtaaaaatacacaAGTCAGTGTCCTTGAGTTAAGGATACAACAATAATCAATTTCGCAGCATTTGCCAGTATTCAGCGTTATGTTAtttgagattgttttttttgtttttttcccctgggCTGAATGTTTGTTGAGATGAAACTATGAATACTTATAACCCACTCTAtgctgacaaaaaactaaagtcaAATAATTTGCTAATCTGTCAATGTTATCCAGTATGACATTTTTGATACTAGAAAAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU32804 lncRNA upstream 55429 29311623 ~ 29311944 (+) True G26146
TU32753 lncRNA upstream 284992 29074456 ~ 29082381 (+) True G26103
TU32676 lncRNA upstream 466247 28900058 ~ 28901126 (+) False AMCG00007763
TU32611 lncRNA upstream 635972 28731130 ~ 28731401 (+) True G25984
TU32559 lncRNA upstream 667632 28682171 ~ 28699741 (+) True AMCG00007754
TU32837 lncRNA downstream 6653 29374376 ~ 29375878 (+) True G26171
TU32864 lncRNA downstream 171960 29539683 ~ 29540062 (+) True G26196
TU32910 lncRNA downstream 344776 29712499 ~ 29724420 (+) True AMCG00007788
TU32916 lncRNA downstream 358671 29726394 ~ 29729537 (+) True G26243
TU32926 lncRNA downstream 370979 29738702 ~ 29741082 (+) True G26249
AMCG00007777 mRNA upstream 5886 29355051 ~ 29361487 (+) True AMCG00007777
AMCG00007776 mRNA upstream 15491 29351070 ~ 29351882 (+) True AMCG00007776
AMCG00007773 mRNA upstream 24793 29339646 ~ 29342580 (+) True AMCG00007773
AMCG00007775 mRNA upstream 30483 29321231 ~ 29336890 (+) True AMCG00007775
AMCG00007774 mRNA upstream 78680 29258430 ~ 29288693 (+) True AMCG00007774
AMCG00007781 mRNA downstream 25184 29392907 ~ 29402001 (+) True AMCG00007781
AMCG00007785 mRNA downstream 65289 29433012 ~ 29437033 (+) True AMCG00007785
AMCG00007784 mRNA downstream 69943 29437666 ~ 29485183 (+) True AMCG00007784
AMCG00007787 mRNA downstream 218750 29586473 ~ 29608597 (+) True AMCG00007787
AMCG00007788 mRNA downstream 254588 29622311 ~ 29724734 (+) False AMCG00007788
TU32711 other upstream 363600 29003095 ~ 29003773 (+) True AMCG00007769
TU32501 other upstream 912666 28453009 ~ 28454707 (+) False AMCG00007735
TU32400 other upstream 1272632 28083822 ~ 28094741 (+) True G25822
TU31514 other upstream 5172892 24192221 ~ 24194481 (+) True AMCG00007631
TU31151 other upstream 6173852 23189460 ~ 23193521 (+) True G24824
TU32939 other downstream 398105 29765828 ~ 29775035 (+) False G26258
TU33841 other downstream 6243393 35611116 ~ 35620801 (+) False AMCG00007873
TU34416 other downstream 8777261 38144984 ~ 38146850 (+) True G27518
TU34423 other downstream 8800847 38168570 ~ 38170061 (+) False AMCG00007952
TU34447 other downstream 8988206 38355929 ~ 38412929 (+) False AMCG00007957

Expression Profile