RNA id: TU32837



Basic Information


Item Value
RNA id TU32837
length 217
lncRNA type inter_gene
GC content 0.44
exon number 3
gene id G26171
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 29374376 ~ 29375878 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTGTGTAAGATCTCTCAACCGACGGGATGTTCTTCCTGTAATCCTCTCTCACTGTCTGCTCACTACATCACCCATTGATTCAAAACAGACACGTTTCACATTGCTGTGTGGACTACTACTCATTCTAAGAGTCGTGTGGAAATTTAACGACTGGACGAAATGCAAGGTGAAGAATGCCAGTGTACATTTGTTGTGAGCCTGAAATCTTCAGTACGGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU32833 lncRNA upstream 6653 29367373 ~ 29367723 (+) True G26167
TU32804 lncRNA upstream 62432 29311623 ~ 29311944 (+) True G26146
TU32753 lncRNA upstream 291995 29074456 ~ 29082381 (+) True G26103
TU32676 lncRNA upstream 473250 28900058 ~ 28901126 (+) False AMCG00007763
TU32611 lncRNA upstream 642975 28731130 ~ 28731401 (+) True G25984
TU32864 lncRNA downstream 163805 29539683 ~ 29540062 (+) True G26196
TU32910 lncRNA downstream 336621 29712499 ~ 29724420 (+) True AMCG00007788
TU32916 lncRNA downstream 350516 29726394 ~ 29729537 (+) True G26243
TU32926 lncRNA downstream 362824 29738702 ~ 29741082 (+) True G26249
TU32937 lncRNA downstream 379162 29755040 ~ 29819552 (+) False G26258
AMCG00007777 mRNA upstream 12889 29355051 ~ 29361487 (+) True AMCG00007777
AMCG00007776 mRNA upstream 22494 29351070 ~ 29351882 (+) True AMCG00007776
AMCG00007773 mRNA upstream 31796 29339646 ~ 29342580 (+) True AMCG00007773
AMCG00007775 mRNA upstream 37486 29321231 ~ 29336890 (+) True AMCG00007775
AMCG00007774 mRNA upstream 85683 29258430 ~ 29288693 (+) True AMCG00007774
AMCG00007781 mRNA downstream 17029 29392907 ~ 29402001 (+) True AMCG00007781
AMCG00007785 mRNA downstream 57134 29433012 ~ 29437033 (+) True AMCG00007785
AMCG00007784 mRNA downstream 61788 29437666 ~ 29485183 (+) True AMCG00007784
AMCG00007787 mRNA downstream 210595 29586473 ~ 29608597 (+) True AMCG00007787
AMCG00007788 mRNA downstream 246433 29622311 ~ 29724734 (+) False AMCG00007788
TU32711 other upstream 370603 29003095 ~ 29003773 (+) True AMCG00007769
TU32501 other upstream 919669 28453009 ~ 28454707 (+) False AMCG00007735
TU32400 other upstream 1279635 28083822 ~ 28094741 (+) True G25822
TU31514 other upstream 5179895 24192221 ~ 24194481 (+) True AMCG00007631
TU31151 other upstream 6180855 23189460 ~ 23193521 (+) True G24824
TU32939 other downstream 389950 29765828 ~ 29775035 (+) False G26258
TU33841 other downstream 6235238 35611116 ~ 35620801 (+) False AMCG00007873
TU34416 other downstream 8769106 38144984 ~ 38146850 (+) True G27518
TU34423 other downstream 8792692 38168570 ~ 38170061 (+) False AMCG00007952
TU34447 other downstream 8980051 38355929 ~ 38412929 (+) False AMCG00007957

Expression Profile